Gene Information

Name : Snas_5704 (Snas_5704)
Accession : YP_003514427.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Unknown
Product : FAD linked oxidase domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 6065713 - 6067089 bp
Length : 1377 bp
Strand : +
Note : PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 putative glycolate oxidase

DNA sequence :
ATGTTCCTCGATGACCTGCGTGCGGCCGTGGACGCTTCGGTGATCGTCACCGACCCCGACGTGCTGGCCGCCCACTCCCG
CGACGAGGCCGACCTGTGCGAGTCGGGTCAGCCGCTGGTTTTGGTGCGGCCCAAGAACACCGCCGACGTGTCGATGGCCG
TCAAGGTCGCCGCCGAGCACGGCGTCCCCGTGGTCCCGCAGGGCGCCCGCACCGGGCTGGCGGGCGGCGCCAACGCCGTG
GACGGCTGCATGCTGCTGTCGACGGCCGCGATGAACGAGATCCGCGAGATCGACCCCGTCAACCGGCTCGCCGTGGTGCA
GCCGGGCGTGGTCAACGCCGAGATCTCGCGGGCCGCGGCCAAACACGGGCTGCGCTACGCCCCCGACCCCGGTTCCTTCG
AGTCCTCCACGATCGGCGGCAACGTCGCCACCAACGCGGGCGGCATGTGCTGCGTCAAGTACGGCGTCACCGACGGCTAC
GTCCTCGGCCTGCAGGTCGTGCTCGCCAACGGCGAGGTGATGCGCTGCGGGCGCCGCACCGCCAAGGGCGTGGCCGGTTA
CGACCTGACCCGGCTGTTCACCGGCAGCGAGGGGACGCTGGGCGTCATCACCGAGATCACGGTGCGGCTGACGCCGATCC
CGCGCCAGGCGCTGACGCTGGCGGCGGTGTTCCCGTCGACGACGGCCGCGGGCCGGGCGGTCACCGCGATCACGGCGGCC
GGGGCGCAGCCGAGCCTGCTGGAGCTCATCGACCAGGTGCACCTCAAGGCCATCGAGGACCACCGGCCGATGGGGCTGGA
CACTGAGGCGGCGGCGATGCTGCTGGCGGCCTGCGACACCGGCATCGAGTCCGACCTGGCCGAGATCGAGCGGCTGTGCG
AGGAATCCGGTGCCACCGAGGTGTACCGCGCCACCGACGCGGCCGAGGCCGAGGCGCTGCTGGCGGCGCGTCGGCTGGCC
TACCCGGCCATGGAGAAACTGGGCACCATCATCGTCGACGACATCGCGGTGCCGCGCGACCGGCTGGCCGAGGCGCTGGA
CGGCGTGGCGGCGGCCTCGCGCCGCAACGGCGTCACGATCGGGGTCATCGCGCACGCCGGGGACGGCAACCTCCACCCCA
ACATCGTCGTCGACGGCCAGGATCCGTCCAGTGTGGTCGCGGGCCGGACGGCCTTCGACGAGATCATGGAACTGGCGCTG
GCGCTGGGCGGCACCTGCTCGGGCGAACACGGTGTCGGCCTGCTGAAACGCGACTGGCTGGCCGAGGAGGCCGACGCGGT
GAACATGCGCGTCCACCGTGCCGTCAAGGACGCGCTGGATCCGGCGGGGATCCTCAACCCGGGGAAGGTGCTGCGAGCCC
GGCGAGAAATCGTCTGA

Protein sequence :
MFLDDLRAAVDASVIVTDPDVLAAHSRDEADLCESGQPLVLVRPKNTADVSMAVKVAAEHGVPVVPQGARTGLAGGANAV
DGCMLLSTAAMNEIREIDPVNRLAVVQPGVVNAEISRAAAKHGLRYAPDPGSFESSTIGGNVATNAGGMCCVKYGVTDGY
VLGLQVVLANGEVMRCGRRTAKGVAGYDLTRLFTGSEGTLGVITEITVRLTPIPRQALTLAAVFPSTTAAGRAVTAITAA
GAQPSLLELIDQVHLKAIEDHRPMGLDTEAAAMLLAACDTGIESDLAEIERLCEESGATEVYRATDAAEAEALLAARRLA
YPAMEKLGTIIVDDIAVPRDRLAEALDGVAAASRRNGVTIGVIAHAGDGNLHPNIVVDGQDPSSVVAGRTAFDEIMELAL
ALGGTCSGEHGVGLLKRDWLAEEADAVNMRVHRAVKDALDPAGILNPGKVLRARREIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 5e-46 42