Gene Information

Name : Snas_5942 (Snas_5942)
Accession : YP_003514662.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6302973 - 6303656 bp
Length : 684 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RS03080 ABC transporter ATP-binding protein

DNA sequence : 
ATGATCCGGCTGACGAAGGTGACCAAGACCTACCCCGGTGACGTCACGGCACTGGACGAGGTGTCGCTGGACGTCGATCC
GGGTGAGCTGGTGGCGATCGCGGGCCCGTCGGGTTCGGGGAAGTCCACCATGCTCAATGTCATCGGCACCCTGGATCGTT
GCAGCTCAGGGGATGTCCGCATCGCCGGGCACGACGTGTCCGGACTGTCGGACGCCCAGCTGTCGGCGCTGCGGGCCCGT
CACATCGGCTTCGTGTTCCAGCACTTCCATCTCGCCTCCGGCGTCATGGCACTGGACAATGTGGCCGACGGGTTGCTCTA
TAGTGGCCATTCGTTGTCGCGGCGGCGCGAGCTCGCCGAGACGGCACTGCGGCGGGTCGGGCTGGGTCACCGGCTCGACC
ACGAACCGCATGAGCTGTCGGGTGGCGAGAAGCAGCGGGTCGCGATCGCCAGGGCGGTCGCGGGCAACCCGCCACTGCTG
CTGGCCGACGAGCCGACCGGGGCGCTGGACTCGGTGTCGGGCACGCAGGTCATGGAACTGCTGCGCGAACTCAACGACTC
CGGCACGACGGTCGTGATCATCACGCACGACCGCGAGATCGCGGCCAGCCTGCCCCGGCAGGTGCGGATGCGCGACGGCC
GGATCGAGACGCCGTCGCTGTCGGGCAGGGTGATGACGCCGTGA

Protein sequence : 
MIRLTKVTKTYPGDVTALDEVSLDVDPGELVAIAGPSGSGKSTMLNVIGTLDRCSSGDVRIAGHDVSGLSDAQLSALRAR
HIGFVFQHFHLASGVMALDNVADGLLYSGHSLSRRRELAETALRRVGLGHRLDHEPHELSGGEKQRVAIARAVAGNPPLL
LADEPTGALDSVSGTQVMELLRELNDSGTTVVIITHDREIAASLPRQVRMRDGRIETPSLSGRVMTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_5942 YP_003514662.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-46 50
Snas_5942 YP_003514662.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-36 47
Snas_5942 YP_003514662.1 ABC transporter-like protein NC_012469.1.7686946. Protein 3e-25 41
Snas_5942 YP_003514662.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-32 41