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Name : HMU11060 (HMU11060) Accession : YP_003517087.1 Strain : Helicobacter mustelae 12198 Genome accession: NC_013949 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 1228290 - 1229468 bp Length : 1179 bp Strand : + Note : evidence=ISS; db_xref=cjejuni:Cj0240c; date=20070321; method=automatic:reciprocal fasta DNA sequence : ATGCAAAAAAAGAGAATCTACTTGGATAATAACGCCACAACGATGCTAGATCCTAGCGTCAAAGAATTGATGGAGCCATT TTTTTGTGAACATTATGGCAATCCCAATTCCCTACATAAATTTGGCACCGAAATCCATCCTGCACTTCACGATGCTTTCA ATAAACTCTATGATGGAATTTGCGCACGCGAAGAAGATGACATCATTATCACTTCTTGTGCCACAGAGTCCAATAACTGG GTACTTAAGGGTGTTTATTTTGATCAAATTGCCACAGGAAAAAAAAACCACATCATCACCACAAGCGTCGAACATCCTGC CATAAGTGCTACTTGCAGATTTTTGGAATCCCTTGGAGTGAGGGTCACCTATCTAGACATCAATAAAGAGGGGAATATTT CACCAGAACAGGTGCGCGAAGCCATCACTGAAGAAACCGCACTTGTAAGCGTGATGTGGGCAAATAATGAAACAGGATTG ATTTTCCCCATTGAAGAAATTGGAGCCATTTGTGAAGAAAGAGGAGTTTTATTTCACACCGATGCTGTACAGGCCATTGG CAAGATTCCTGTAGACGTGCAAAAGGCAAAGGTGGATTTCCTCTCCTTTTCTGCGCATAAATTTCATGGGCCAAAGGGCA TTGGGGCATTGTATATCAAAAATGGACGCGAGCTTGCTCCATTGCTCCATGGCGGAGAGCATATGAGAGGGAGGCGCAGC GGGACACTCAATGTCCCCTATATCGTCGGCATGGGAGAAGCGATGCGTCTAGCAAATGCGTATTTGGATTTTGAAAATTC CACAATCTTGAAACTTCGCAATTATCTAGAGGATGCGCTTTTGCAAATCCCTGATGTGGTGGTAATAGGAGATAGAGTCC ATCGCGTACCAAACACCACACTCATCAGTGTGCGCGGAATCGAGGGAGAGGCCATGCTTTGGGATCTCAACAAAGCAGGG ATCGCCTGTTCTACAGGAAGTGCTTGTGCAAGCGAGGATTTGGAAGCCAATCCTGTGATGGTGGCTATTGGCGCGGACAA AGAGCTGGCACACACAGCAGTGAGAATTTCTCTGTCGCGCTTCACCACTCAAGAAGAAATTGACTACACCATTTCTGTTT TTCAAAAGGCTGTCGAGAGACTACGCAATATTTCGAGTTCGTATGAAGGGAGTTTGTAA Protein sequence : MQKKRIYLDNNATTMLDPSVKELMEPFFCEHYGNPNSLHKFGTEIHPALHDAFNKLYDGICAREEDDIIITSCATESNNW VLKGVYFDQIATGKKNHIITTSVEHPAISATCRFLESLGVRVTYLDINKEGNISPEQVREAITEETALVSVMWANNETGL IFPIEEIGAICEERGVLFHTDAVQAIGKIPVDVQKAKVDFLSFSAHKFHGPKGIGALYIKNGRELAPLLHGGEHMRGRRS GTLNVPYIVGMGEAMRLANAYLDFENSTILKLRNYLEDALLQIPDVVVIGDRVHRVPNTTLISVRGIEGEAMLWDLNKAG IACSTGSACASEDLEANPVMVAIGADKELAHTAVRISLSRFTTQEEIDYTISVFQKAVERLRNISSSYEGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-51 | 42 |
