Gene Information

Name : ycfJ (PANA_1500)
Accession : YP_003519795.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3134
EC number : -
Position : 1686993 - 1687535 bp
Length : 543 bp
Strand : +
Note : Outer Membrane Lipoprotein YcfJ; Similar to Pantoea sp. At-9b, 17 kDa surface antigen (NCBI: ZP_05728403.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Outer Membrane

DNA sequence :
GTGAATAAATCAATGTTAGCGGGTATCGGTATTGGCGTGGCAGCGGCACTGGGTGTAGCCGCCGTAGCAAGCATTAACGT
GTTTGATCGCGGTCCACAATATGCACAGGTGCTGTCAGCAACCCCAATTAAAGAATCGATTAAACAACCGCGTCAGGAGT
GTCGTAACGTGACGCTGACGCACCGTCGTCCGGTTCAGGATGAAAACCGTATCGCCGGTTCAGTACTGGGTGCGGTAGCC
GGTGGTGTTCTCGGCCACCAGTTTGGCGGCGGTCGTGGACGCGACGTCGCAACGGTAGCCGGTGCGCTGGCGGGCGGTTA
TGCGGGCAACCAGGTTCAGGGCGGTATGCAGGATCGCGATACCTACACCACCTCTGAACAGCGTTGTAAAACCGTGTACG
ACAAGCAGGAAAAAATGCTGGGTTATGACGTCACCTATAAGATCGGCGACCAGCAGGGTAAAATCCGCATGGAAAACGAT
CCCGGTACCCGTATCCCGGTTGACCGTAACGGACAGTTAATCCTGAACGGCGATAAAGCATAA

Protein sequence :
MNKSMLAGIGIGVAAALGVAAVASINVFDRGPQYAQVLSATPIKESIKQPRQECRNVTLTHRRPVQDENRIAGSVLGAVA
GGVLGHQFGGGRGRDVATVAGALAGGYAGNQVQGGMQDRDTYTTSEQRCKTVYDKQEKMLGYDVTYKIGDQQGKIRMEND
PGTRIPVDRNGQLILNGDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96065.1 hypothetical protein Not tested T-PAI Protein 7e-32 60