Gene Information

Name : ndpA (PANA_2579)
Accession : YP_003520874.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : NdpA
Function : -
COG functional category : R : General function prediction only
COG ID : COG3081
EC number : -
Position : 2885049 - 2886092 bp
Length : 1044 bp
Strand : -
Note : Nucleoid-associated protein NdpA; Similar to Pantoea sp. At-9b, 37kDa nucleoid-associated protein (NCBI: ZP_05730925.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence : 
GTGTTTGAATACGCGCCTGTGCTATTAGGAGAGTTTACCATGAGTCTGGATATCGACCAGATTGCCTTGCACCAGTTAAT
CAAACGTGATGAAAATCAGTTAGAGCTGGTGCTTCGTGATTCGTTACTGCCGGCCACCAATACCGTCGAGGCGATGGTGG
AAGAGCTGCACCGTGTATACAGTGCAAAAAGTAAAGCTTACGGGCTGTTTAATGCTGAAAGCGAACTGGCAGATGCACTG
CGCAACTGCCGCAAGGGTAACGATGATTTTCTCGCTTTTAGCCGGGCTGCTACCGGACGCCTGCGTGATGAACTGGCAAA
ATATCCGTTCGCCGAAGGCGGCGTGGTGCTGTTTATCCAGTACCGCTATCTGGCGGTAGAATACTTGCTGGTGGCGGTGT
TAAACAGCCAGTCGAGTATGCGCGTCAACGAACAGATGGATATCAGCAGTACCCACTATCTGGATATCAATCACGCCGAT
ATTGTGGCACGAATCGATCTTACCGAGTGGGAAACCAGCCCTGAATCGACGCGCTACCTCACCTTCCTGCGTGGACGGGT
AGGGCGAAAAGTTTCTGATTTCTTCATGGATTTTCTGGGGGCGGAAGTCGGACTGGATACCAAGGCGCAGAACCGGGGGC
TGTTACAGGCGGTAGATGACTATTGTGACGAGTCGAATCTGGATAAGAATGAACGACAAAACTATCGTCAGCAGGTTTAC
AGCTACTGTAATGAACAGCTTCAGGCTGGGGAAGAGATCGCGCTGAAAGCGTTATCAGGTGAGCTGCCGCCACTGGGTGA
AAAGACGTTTGAAGCCTTTACTCAGGAGCAGGGCTATGACCTGGAAGAGCATTTCCCGGCAGATCGCAGTACGTTACGTC
AGTTAACCAAGTTTGCCGGTAGCGGTGGGGGGCTGACCCTGAACTTCGATGCCCTGTTGCTTGGCGAGCGCATTTTCTGG
GATCCGGTCACCGATACGCTGACCATCAAAGGAACACCGCCTAACCTGCGTGAGCAGCTGCAACGCCGCACCAGCAGTAA
ATAA

Protein sequence : 
MFEYAPVLLGEFTMSLDIDQIALHQLIKRDENQLELVLRDSLLPATNTVEAMVEELHRVYSAKSKAYGLFNAESELADAL
RNCRKGNDDFLAFSRAATGRLRDELAKYPFAEGGVVLFIQYRYLAVEYLLVAVLNSQSSMRVNEQMDISSTHYLDINHAD
IVARIDLTEWETSPESTRYLTFLRGRVGRKVSDFFMDFLGAEVGLDTKAQNRGLLQAVDDYCDESNLDKNERQNYRQQVY
SYCNEQLQAGEEIALKALSGELPPLGEKTFEAFTQEQGYDLEEHFPADRSTLRQLTKFAGSGGGLTLNFDALLLGERIFW
DPVTDTLTIKGTPPNLREQLQRRTSSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01050 YP_001437154.1 nucleoid-associated protein NdpA Not tested Not named Protein 2e-127 84