Gene Information

Name : fecI (PANA_2589)
Accession : YP_003520884.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : FecI
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2898973 - 2899539 bp
Length : 567 bp
Strand : +
Note : Probable RNA polymerase sigma factor FecI; Similar to Pectobacterium atrosepticum SCRI1043, RNA polymerase sigma factor (NCBI: YP_049380.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :

GTGTTAAGTTTTCAGATGGGGGACATTATGCCTGCCGACATGACCGATCGTTCAGATATATTAACGCTTATTTTTCGCAG
CGATTATCGCTGGCTGACGGATAAATTACGGCGTCGAATTAGCTACGGCACCATGGCAGAAGATATCGCTTCTGAAGCGT
TTTTACGTCTGGCGGCAATTCCGGAACTGCCCCACATTCGCGAGCCGAGGGCCATGCTGACGACACTGGCCCAGCGCGTG
TTATATGAAAACTGGCGACGCCGCGACCTTGAACAGGCTTATCTCAAAGCTCTGGCAGATAGCCCGCAGCATTGTCACCC
CTCGCCCGAAGAACTGGAGATGGTGATGGAGTCTTTACTGGCTATCGATCGCGCTCTGGATGGCTTGTCCGTAAATGCGA
GAAAGGCCTTTTTGCTCAACCAACTGGATGGCATGACCTATGCTGAAATCGCTAAAGAGCTTGGCGTATCAGCCAGTATG
GTGCGTAAATATGTGGCTAAAGCACTGACGAATTGTTATCTGGTGGCTCAGGGTCAATCTGACCCGATGGCGGGACATCA
CAAATGA

Protein sequence :

MLSFQMGDIMPADMTDRSDILTLIFRSDYRWLTDKLRRRISYGTMAEDIASEAFLRLAAIPELPHIREPRAMLTTLAQRV
LYENWRRRDLEQAYLKALADSPQHCHPSPEELEMVMESLLAIDRALDGLSVNARKAFLLNQLDGMTYAEIAKELGVSASM
VRKYVAKALTNCYLVAQGQSDPMAGHHK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	6e-28	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_003520884.1	FecI	VFG1049	Protein	2e-28	48