Gene Information

Name : cspB (PANA_0382)
Accession : YP_003518677.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : CspB
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 454729 - 454968 bp
Length : 240 bp
Strand : -
Note : Cold shock-like protein CspB; Similar to Serratia proteamaculans 568, cold-shock DNA-binding domain-containing protein (NCBI: YP_001480086.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
GTGGCTCAAAATGAAAAGGACACATCTATGTCAACTAAAATGACTGGTTTAGTAAAATGGTTTAACGCTGATAAAGGCTT
CGGCTTTATTTCTCCTCAGGACGGCAGCAAAGATGTATTCGTACATTTCTCTGCTATTCAGAGCAGCGATTTCAAAACAT
TAGATGAAGGCCAGAAAGTGGAGTTCTCAATCGAGAACGGCCCTAAAGGTCCTTCAGCTGGCAATGTTGTTGCTCTGTAA

Protein sequence :
MAQNEKDTSMSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSDFKTLDEGQKVEFSIENGPKGPSAGNVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 6e-22 79
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-09 48