Gene Information

Name : cspB (PANA_0915)
Accession : YP_003519210.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : CspB
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1067659 - 1067871 bp
Length : 213 bp
Strand : +
Note : Cold shock-like protein CspB; Similar to Pantoea sp. At-9b, cold-shock DNA-binding domain protein (NCBI: ZP_05726907.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGTCTAACAAAATCCGCGGTACCGTTAAATGGTTCAACGCTGAGAAAGGCTTCGGTTTCATCTCTCCTCAGGACGGCAG
CAAAGATGTATTCGTACATTTCTCTGCAATTCAGGGCACAGATTTCCGTTCATTAGATGAAGGTCAACAAGTTGAGTTTA
CAGTAGAAAATGGTGCCAAAGGCCCAGCTGCTGCGAACGTTGTTGGTCTCTAA

Protein sequence :
MSNKIRGTVKWFNAEKGFGFISPQDGSKDVFVHFSAIQGTDFRSLDEGQQVEFTVENGAKGPAAANVVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-21 69
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-07 47