Gene Information

Name : Slit_R0004 (Slit_R0004)
Accession : -
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 357388 - 358915 bp
Length : 1528 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence : 
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGCAGCACGGGTGCTTGCAC
CTGGTGGCGAGTGGCGAACGGGTGAGTAATGTATCGGAACATGTCCGGAAGTGGGGGATAACGTAGCGAAAGTTACGCTA
ATACCGCATATGCCCTGAGGGGGAAAGGTGGGGATCGCAAGACCTATCGCTTTCGGAGTGGCCGATATCAGATTAGCTAG
TTGGTGAGGTAAAGGCTCACCAAGGCGACGATCTGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACG
GCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGA
AGAAGGCCTTCGGGTTGTAAAGCTCTTTCAGACGGAAAGAAATCGTGCAGGCCAATACCCTGTATGGATGACGGTACCGT
CAGAAGAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGT
AAAGCGTGCGCAGGCGGTTTTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAACTGCATTTGTGACTGCAAGGC
TAGAGTATGGCAGAGGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGG
CAGCCCCCTGGGTCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC
CTAAACGATGTCAACTAGGTGTTGGGGGAGGAGACTTCCTTAGTACCGCAGCTAACGCGTGAAGTTGACCGCCTGGGGAG
TACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATTATGTGGATTAATTCGATGCAAC
GCGAAAAACCTTACCTACCCTTGACATGCCGAGAATCCTGAAGAGATTTGGGAGTGCCCGAAAGGGAACTTGGACACAGG
TGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAATTGC
CATCATTCAGTTGGGCACTTTAATGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCC
CTTATGGGTAGGGCTTCACACGTAATACAATGGTCGGTACAGAGGGTTGCCAACCCGCGAGGGGGAGCCAATCTCAGAAA
GCCGATCGTAGTCCGGATTGTTCTCTGCAACTCGAGAGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGTCGC
GGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGCGGGTTCTGCCAGAAGTAGCTAGTCTAACC
GCAAGGAGGACGGTTACCACGGCAGGGTTCGTGACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTG
GATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-161 85.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-161 85.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-228 84.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-228 84.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-228 84.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-228 84.3