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Name : Nhal_1927 (Nhal_1927) Accession : YP_003527422.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : TrmH family RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1989708 - 1990436 bp Length : 729 bp Strand : + Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: noc:Noc_1646 RNA methyltransferase TrmH, group 1 DNA sequence : ATGTCATTGGCGAAAGTGCGTATTGTGTTGGTGGGGACCACCCATCCCGGCAACATTGGGGCGGCAGCGCGGGCCATGCA TACCATGGGATTATCCCGGTTATACTTAGTGAATCCGGCGCGTTTTCCCTGTGCTGAGGCGACAGCGCGGGCCTCCGGTG CGGATGAGTTGCTGGCCCAGGCGGAAATTTGCACTAGCTTGCCCCAAGCAATAGCCGGTTGCCGAATGGTGTTTGGGTTG AGCGCCCGGTCTCGGAATATTTCTTGGCCGGCCCTAGATGCCCGGGCCTGTGGTGCCCTGACCGTCCAGGAGGCCCTGGA GGGGGAGGTGGCGATAGTGTTTGGCCGGGAACATTCGGGACTTTCCAATATTGAGCTGGATCATTGCCATTATTGGGTCC ATATTCCAAGTAACCCAGCGTATAGTTCCCTTAACTTGGCGGCGGCGGTGCAGGTGATGGCCTACGAAGTTCGGATGGCC GCTATGGCAGGAGCTTCTCCCCCTGCCCGACGCCCCACCGAATCGCCGCCGGCATCCGTCGATGAAGTAGAAGGCTTTTT TCAGCATCTGGAGCAGACCCTGATAGAGATCGGTTTTCTTAATCCGAGTAATCCCAAGCTTTTGATGCGCCGCCTACGCC GCTTATTTTTTCGCGCTCATCTTGAGATCCGTGAAGTGAATATCTTGCGCGGGATTTTGACGGCTGCCCAGGATAAAGTA AAAGGGTGA Protein sequence : MSLAKVRIVLVGTTHPGNIGAAARAMHTMGLSRLYLVNPARFPCAEATARASGADELLAQAEICTSLPQAIAGCRMVFGL SARSRNISWPALDARACGALTVQEALEGEVAIVFGREHSGLSNIELDHCHYWVHIPSNPAYSSLNLAAAVQVMAYEVRMA AMAGASPPARRPTESPPASVDEVEGFFQHLEQTLIEIGFLNPSNPKLLMRRLRRLFFRAHLEIREVNILRGILTAAQDKV KG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 7e-61 | 56 |
