|
Name : Nhal_0852 (Nhal_0852) Accession : YP_003526415.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 869501 - 871486 bp Length : 1986 bp Strand : - Note : TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: noc:Noc_0943 cytochrome C biogenesis protein CcmF DNA sequence : ATGATTCCAGAACTTGGCCATCTTGCACTAATTCTTGCACTCACCCTAGCCCTCGCCCAATCGATATTGCCGCTTGTTGG AGCACAGCGTGGAGTCATCGGCTGGATGAACATGGCGCGAACTGCGGCCTACGGTCAGTGTTTCTTTTTAACTGTTGCTT TCACCTGTCTTGCCATCAGCTTTATCAATAATGATTTCTCCGTAGCCTACGTGGTCAACAATTCCAATTCCGCGTTACCG ATGGCTTATCGCTTTGCCGCCATCTGGGGTTCCCACGAAGGCTCGTTACTGCTGTGGAGTCTCATTCTCGGCTTGTGGAT GGTTGCCGTCGCCCTGTTTAGCCGTAGCATCCCCCTGGCTTATATCGCGCGCGTGTTGGCGGTAATGGGCATGATTAATG TCGGCTTTTTGCTGTTCATGATCCTGACCTCCAATCCGTTTTTACGCCACTTTCCCGCCCCCCTAGACGGGCAAGATCTC AATCCGTTGCTGCAAGACCCGGGTCTGGTCATCCATCCTCCCATGCTCTATATGGGTTACGTCGGCTTTTCCGTAGCCTT TAGCTTTGCCATCGCAGCGCTTATTGGCAAGCGCCTAGATGCAGCCTGGGCTCGGTGGTCCAGACCCTGGACAGTGGTCG CCTGGTTATTTTTATCCATCGGCATTACCTTAGGGAGCTGGTGGGCCTACTACGAGCTTGGCTGGGGCGGCTGGTGGTTT TGGGATCCGGTAGAAAATGCCTCTTTTATGCCATGGCTAGTTGGCACCGCTCTCATTCACTCCCTTGCGGTGACTGAAAA ACGCGATGCCTTCAAACGCTGGACGGTATTACTCGCTATCTTTGCCTTTTCCCTCAGTCTGCTAGGAACTTTCCTGGTCC GTTCCGGGGTGCTCACTTCCGTACACGCCTTTGCCACCGATCCCACCCGCGGAGTCTTCATCCTGATCTTGCTGGGAATC GCCGTCGGCGGATCCCTGCTGCTCTATGCCATGCGGGCACCGTTGGTAAAAGACACCGGCCGTTTTCATCTCCTTTCCCG GGAAGGCTTTCTTTTGGCCAACAATGTAGTACTCATCGTGGCGGCCGGCAGTGTGTTGCTGGGCACCCTCTATCCGCTGG TTCTCGAGGGCTTGGGGCTAGGTAAAATCTCAGTGGGCCCGCCCTATTTTGACACCGTGTTTGTGCCTTTAATGGTCATC CTGGCCTTTCTGTTAGGCGCAGGCCCCATAGCACGCTGGAGGCAACAAAGCCTGGGTGAACTCATCAAAAGACTAGGTTT TATCTTTGCCATCAGCCTAACCATTGGGATCCTGGTGCCTTATGCCGTTGATAAAGGAGAAATTCTTAGCGTAGCTGCTG GACTTACGGTCGCTATCTGGATCGCCCTGAGCACTCTTCTTGGGCTCTGGAATCGGCTTAGAAACCGGGGTGGAGTTGCA GGGGTAAGTTCCCTATCGCGAAGCTTTATGGGAATGTCCCTGGCCCATCTGGGTTTTGCCGTCTCCATTGTAGGGGTCAC CTTAACAACGATGTATGGGCAGGATCGGGATGTGGGCGTTGCCATTGGCGAAGCCGCAGAATTAGGCGCCTATGAATTCC GTTTAGATGACATTCGTGAGGTAAATGGCCCCAACTACCGGGCCCTCGAAGGAACCGTATCCGTTCTCAAGGGTGGAGAA TTGATCACTACGCTCCAAACCCAGAAACGTATCTACCGGGTCCAAACCTCCCCCATGACAGAAGCCGGCATTGATGCAGG CTTGTTCCGAGACTTGTTTGTCGCCCTGGGAGACTCACTGGGGAACAATACTTGGAGTCTGCGCATTCAATTTAAGCCTT TTGTGCGCTGGATCTGGCTAGGAGGATTGTTAATGGCCCTAGGTGGTGCCGTTGCAGTCAGCGATCGGCGTTATCGGGTG AGCATGCAGAAAATGCGTTTTAAGCAGCTCAAAACTTCTCAACCTGCGGCTACAGCTGAAGTCTAA Protein sequence : MIPELGHLALILALTLALAQSILPLVGAQRGVIGWMNMARTAAYGQCFFLTVAFTCLAISFINNDFSVAYVVNNSNSALP MAYRFAAIWGSHEGSLLLWSLILGLWMVAVALFSRSIPLAYIARVLAVMGMINVGFLLFMILTSNPFLRHFPAPLDGQDL NPLLQDPGLVIHPPMLYMGYVGFSVAFSFAIAALIGKRLDAAWARWSRPWTVVAWLFLSIGITLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALIHSLAVTEKRDAFKRWTVLLAIFAFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILILLGI AVGGSLLLYAMRAPLVKDTGRFHLLSREGFLLANNVVLIVAAGSVLLGTLYPLVLEGLGLGKISVGPPYFDTVFVPLMVI LAFLLGAGPIARWRQQSLGELIKRLGFIFAISLTIGILVPYAVDKGEILSVAAGLTVAIWIALSTLLGLWNRLRNRGGVA GVSSLSRSFMGMSLAHLGFAVSIVGVTLTTMYGQDRDVGVAIGEAAELGAYEFRLDDIREVNGPNYRALEGTVSVLKGGE LITTLQTQKRIYRVQTSPMTEAGIDAGLFRDLFVALGDSLGNNTWSLRIQFKPFVRWIWLGGLLMALGGAVAVSDRRYRV SMQKMRFKQLKTSQPAATAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-141 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-126 | 54 |
