Gene Information

Name : Nhal_0853 (Nhal_0853)
Accession : YP_003526416.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Unknown
Product : CcmE/CycJ protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2332
EC number : -
Position : 871483 - 871926 bp
Length : 444 bp
Strand : -
Note : PFAM: CcmE/CycJ protein; KEGG: noc:Noc_0944 cytochrome c-type biogenesis protein CcmE

DNA sequence :
ATGACTGTGCGCCAAAGACGGTTTGCGATGGTAATGCTGGTGGTTGTAGGAGTATCCATTGCCACCGGACTGGGACTAAA
AGCCTTTCAAAAAAATATTCTCTTCTTTTACAACCCAACCCAGATCATGGCTGGAGAAGTTCCCCCGGACACTAACATCC
GAGTCGGAGGGGTGGTGGTTGATGGTAGCGTGAAACGGGAAAATGGCAGCCTAGATATGCAGTTTGCGCTTACCGATATG
GCGGAGACGGTGACCGTGGTCTATAGCGGCATCCTCCCTGATCTGTTTCGCGAAGGACAGGGGATCGTTGCCATGGGTAA
ACTCGGACCCAATAATGTATTTGAAGCCAGTGAAGTTTTGGCTAAACATGATGAAGAATACATGCCCCCGGAGGTTGCCG
ATGCACTAGCCAAAACCAAAGCCAGCACCGAGGACAAACTATGA

Protein sequence :
MTVRQRRFAMVMLVVVGVSIATGLGLKAFQKNILFFYNPTQIMAGEVPPDTNIRVGGVVVDGSVKRENGSLDMQFALTDM
AETVTVVYSGILPDLFREGQGIVAMGKLGPNNVFEASEVLAKHDEEYMPPEVADALAKTKASTEDKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 1e-34 48
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 3e-24 45