Gene Information

Name : cspE (EAMY_1109)
Accession : YP_003530467.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspE
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1174679 - 1174888 bp
Length : 210 bp
Strand : +
Note : 'Cold-shock' DNA-binding domain

DNA sequence :
ATGTCTAAGATTAAAGGTAGCGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCTGAAGATGGTAGCAA
AGATGTGTTCGTACACTTCTCTGCCATCCAGAGCAACGGTTTCAAAACTCTGGCTGAAGGTCAGCGCGTAGAGTTCGAAA
TCACCAACGGTGCCAAAGGCCCATCTGCTGCTAACGTTGCCGCTATTTAA

Protein sequence :
MSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQRVEFEITNGAKGPSAANVAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-18 75
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 3e-07 49