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Name : hrcC (EAMY_0549) Accession : YP_003529907.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type III secretion system outer membrane pore HrcC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 621578 - 623608 bp Length : 2031 bp Strand : + Note : Bacterial type III secretion system protein, outer membrane pore YscC/HrcC DNA sequence : ATGGTTGAGAAACGAGAGTTGCGCTGCCGGTTGTTGGGCGCGCTATTAATGCTGTGCGCAACACTCCCGGCCGGGGCGCA GACCCCGGCCGACTGGAAAGAACAGTCATACGCCTATTCTGCCGATCGCACGCCGTTATCCACGGTGCTGCAAGATTTTG CTGACGGGCACAGTGTTGATCTTCACCTTGGCAATGTGGAAGACACAGAGGTTACCGCGAAGATCCGCGCTGAAAACGCC AGTGCGTTCCTCGACCGCCTGGCGCTGGAGCACCATTTCCAGTGGTTCGTTTACAACAATACGCTGTACGTCAGCCCTCA GGACGAGCAAAGCTCGGAACGTCTGGAGATCTCCCCGGACGCCGCACCGGATATTAAGCAGGCGCTAAGCGGAATTGGCC TGCTGGACCCGCGTTTTGGCTGGGGAGAACTGCCGGATGATGGCGTGGTGCTGGTGACCGGGCCGCCGCAATATCTGGAG CTGGTTAAGCGCTTCAGTGAGCAACGCGAGAAGAAAGAGGATCGGCGTAAAGTCATGACCTTCCCGCTGCGCTATGCGTC GGTGGCCGACCGCACCATTCATTACCGTGACCAGACGGTGGTGATCCCCGGCGTTGCCACCATGCTGAATGAGCTGATGA ACGGTAAACGCGCGGCGCCAGCCAGCGCCAGCGGCATTGACAGTACGCCGGGAGGCCCGGATACCAACAGCATGATGCAG AATACCCAAACGTTACTGTCGCGTTTATCAAGCCGTAATAAAACCTCCAACAGGGCGGGCGGCAGGGATAACGAGATTGA AGATGTGAGCGGACGCATCTCTGCCGATGTGCGCAACAATGCGCTGCTGATCCGCGATGATGATAAACGTCACGATGAAT ACAGCCAGCTGATTGCCAAAATTGATGTGCCGCAGAATCTGGTTGAGATAGACGCGGTTATTCTGGACATCGACCGCACG GCATTAAACCGGCTGGAAGCGAACTGGCAGGCCACATTAGGCGGTGTAACCGGCGGCAGCTCACTGATGTCCGGCAGCGG TACGCTGTTTGTCAGCGATTTTAAACGCTTCTTTGCCGATATCCAGGCGCTGGAAGGAGAGGGCACCGCCTCGATCGTCG CCAATCCTTCGGTTCTGACGTTGGAAAATCAGCCGGCAGTGATCGACTTCAGCCAGACGGCCTATATCACCGCCACCGGC GAACGCGTAGCGGACATCCAGCCGGTGACGGCAGGCACCAGCCTGCAGGTGACGCCGCGCGCGGTGGGTAACGAAGGCCA TTCCAGCATTCAGCTGATGATTGATATCGAAGACGGCCACGTACAAACCAACGGTGACGGCCAGGCTACCGGCGTGAAAC GCGGCACGGTCAGCACTCAGGCGCTGATCAGTGAGAACCGGGCGCTGGTGCTGGGCGGCTTCCATGTGGAAGAGAGTGCC GATCGCGATCGGCGCATTCCGTTACTGGGCGATATTCCCTGGCTTGGTCAACTGTTCAGCTCAAAGCGCCATGAAATCTC ACAGCGTCAGCGCCTGTTTATTCTTACCCCGCGCCTGATCGGCGATCAAACCGATCCCACGCGTTATGTCACAGCAGATA ACCGCCAGCAGCTGAGCGATGCGATGGGGCGCGTAGAGCGGCGGCACAGCAGTGTGAATCAGCATGATGTGGTGGAAAAC GCACTGCGCGATCTGGCTGAAGGGCAGTCTCCGGCAGGTTTCCAGCCGCAAACCTCCGGTACGCGCTTGAGTGAAGTTTG CCGCAGTACGCCCGCACTGCTGTTCGAAAGTACTCGCGGCCAGTGGTACAGCAGTAGCACTAACGGTGTGCAGCTCAGTG TGGGAGTGGTACGCAATACCAGCAGCAAACCTCTGCGCTTTGATGAAGCCAACTGCGCCAGTAAACGCACGCTGGCAGTG GCGGTGTGGCCGCATAGCGCGCTGGCACCGGGCGAATCGGCGGAAGTTTATCTGGCCATGGATCCAAGCCGCGTGCTGCA CGCGTCACGCGAATCCTTATTGAATCGTTGA Protein sequence : MVEKRELRCRLLGALLMLCATLPAGAQTPADWKEQSYAYSADRTPLSTVLQDFADGHSVDLHLGNVEDTEVTAKIRAENA SAFLDRLALEHHFQWFVYNNTLYVSPQDEQSSERLEISPDAAPDIKQALSGIGLLDPRFGWGELPDDGVVLVTGPPQYLE LVKRFSEQREKKEDRRKVMTFPLRYASVADRTIHYRDQTVVIPGVATMLNELMNGKRAAPASASGIDSTPGGPDTNSMMQ NTQTLLSRLSSRNKTSNRAGGRDNEIEDVSGRISADVRNNALLIRDDDKRHDEYSQLIAKIDVPQNLVEIDAVILDIDRT ALNRLEANWQATLGGVTGGSSLMSGSGTLFVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAVIDFSQTAYITATG ERVADIQPVTAGTSLQVTPRAVGNEGHSSIQLMIDIEDGHVQTNGDGQATGVKRGTVSTQALISENRALVLGGFHVEESA DRDRRIPLLGDIPWLGQLFSSKRHEISQRQRLFILTPRLIGDQTDPTRYVTADNRQQLSDAMGRVERRHSSVNQHDVVEN ALRDLAEGQSPAGFQPQTSGTRLSEVCRSTPALLFESTRGQWYSSSTNGVQLSVGVVRNTSSKPLRFDEANCASKRTLAV AVWPHSALAPGESAEVYLAMDPSRVLHASRESLLNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 2e-167 | 53 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 2e-169 | 53 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 3e-164 | 53 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 1e-164 | 53 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 5e-141 | 45 |
| hrcC | AAT96152.1 | HrcC | Virulence | T-PAI | Protein | 7e-138 | 44 |
| hrcC | AAT96206.1 | HrcC | Virulence | T-PAI | Protein | 5e-138 | 44 |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 2e-140 | 44 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 8e-135 | 43 |
