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Name : secD (EAMY_0954) Accession : YP_003530312.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1033789 - 1035636 bp Length : 1848 bp Strand : + Note : protein-export membrane protein SecD, TC 2.A.6.4.1 Protein-export membrane protein secD DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGATCGTCGTATTACTCGTCGGTCTGCTGTATGCACTGCCCAA CCTTTATGGTGAGGATCCGGCTGTTCAGGTCACTGGTGCGCGCGGAAGCGCGGCCAGTGAGCAAACGCTGGTTCAGATCC AAAGCGCGTTAAAACAAGACAATATACAGAGTAAATCCGTCGCCCTGGAAAAGGGGGCGATTCTGGCGCGTTTCGCTAAC ACTGACGTGCAGCTGCGCGCGCGCGAAGCGATAATCAAAGTCCTTGGCGACGATTATGTGGTGGCGCTCAATCTGGCCCC GGCGACGCCCGCCTGGTTAGCCACATTATCCGCAGAGCCGATGAAGCTCGGTCTCGATCTGCGCGGTGGTGTTCACTTCC TGATGGAGGTGGATATGGACACTGCGCTGGGTAAACTTCAGGATCAAAACATCGACAATCTGCGCAGCGATCTGCGTGAA AAGAGCGTTCCTTACGTTAACGTGCGTAAAACCGGCAATTACGGCCTGGAAATTCGTTTTCGAGATGATAAAACGCGTGA TGAAGCTGTCAGCTATCTGACCACCCGTCACCGCGATATGGTTATCAACAGCAGCGGCAGTAATGCCCTGACGGCGGTCA TGAGCGATGAACGCATGCGTGAAGCCCGCGAATATGCGGTACAGCAGAACATTAATATTCTGCGTAACCGTGTAAATCAG CTGGGCGTTGCGGAGCCTCTGGTTCAGCGTCAGGGCGCCGATCGAATTGTGGTTGAATTACCGGGTATCCAGGATACGGC TCGTGCGAAAGAGATCCTTGGTGCGACGGCCACGCTGGAGTTCCGTCTGGTGAATACCAGCGTCGACGCTACCGCAGCCG CTAACGGCCGCGTACCGGGTGACTCAGAAGTGAAAGACACGCGTGAGGGACAGCCGGTGGTGCTGTACAAGCGCGTGATC CTCACCGGTGACCACATTACCGACTCCACCTCCAGCAACGATGAATACAATCAGCCACAGGTGAATATCTCCCTGGACAG CGCTGGCGGTAATATCATGTCCAACTTCACCAAGGACAGCGTCGGCAAGGCGATGGCAACCCTGTTTGTTGAGTACAAAG ACAGTGGTAAGAAAGACGCTAACGGCCGGGCGATTCTGGAGAAGCATGAAGAGGTGATTAACGTTGCCAATATCCAGTCG CGTCTGGGTAACAGCTTCCGTATTACCGGCATTAATAACCCGAACGAAGCCCGTCAGCTTTCGCTGTTGCTGCGCGCCGG TGCGCTGATTGCGCCTATTCAGATTGTGGAAGAGCGTACTATTGGTCCAACCATGGGTGCGCAGAACATCACTCAGGGTC TGGAAGCCTGCCTGTGGGGGCTGATCGCATCTATCGTCTTCATGGTGGTGTGGTACAAGAAATTCGGCCTGGTGGCGACC AGCGCACTGCTGGCTAACCTGGTGCTGATCGTCGGTATTATGTCGCTGCTTCCGGGCGCTACGCTGACGATGCCCGGTAT TGCCGGTATCGTGCTGACGCTGGCGGTGGCGGTCGATGCTAACGTACTGATTAACGAGCGTATCAAAGAGGAGCTGCGCA ACGGACGTTCCGTACAGCAGGCGATCCATGAGGGTTACAAAGGTGCGTTTTCCAGTATCGTTGATGCCAACGTGACCACG CTGATCAAAGTTATCATTCTGTACGCAGTGGGCACCGGCTCGATTAAAGGGTTTGCCATCACGACTGCGATTGGTGTGGC AACTTCCATGTTTACCGCGATTATCGGCACCCGTGCCATCGTCAACCTGATGTATGGCGGCAAACGCATTAACAAGTTGT CTATCTGA Protein sequence : MLNRYPLWKYIMLIVVLLVGLLYALPNLYGEDPAVQVTGARGSAASEQTLVQIQSALKQDNIQSKSVALEKGAILARFAN TDVQLRAREAIIKVLGDDYVVALNLAPATPAWLATLSAEPMKLGLDLRGGVHFLMEVDMDTALGKLQDQNIDNLRSDLRE KSVPYVNVRKTGNYGLEIRFRDDKTRDEAVSYLTTRHRDMVINSSGSNALTAVMSDERMREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDATAAANGRVPGDSEVKDTREGQPVVLYKRVI LTGDHITDSTSSNDEYNQPQVNISLDSAGGNIMSNFTKDSVGKAMATLFVEYKDSGKKDANGRAILEKHEEVINVANIQS RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGAQNITQGLEACLWGLIASIVFMVVWYKKFGLVAT SALLANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKGAFSSIVDANVTT LIKVIILYAVGTGSIKGFAITTAIGVATSMFTAIIGTRAIVNLMYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-112 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-112 | 48 |
