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Name : secD (EAM_0963) Accession : YP_003538051.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Unknown Product : protein-export membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1071277 - 1073124 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGATCGTCGTATTACTCGTCGGTCTGCTGTATGCACTGCCCAA CCTTTATGGTGAGGATCCGGCTGTTCAGGTCACTGGTGCGCGCGGAAGCGCGGCCAGTGAGCAAACGCTGGTTCAGATCC AAAGCGCGTTAAAACAAGACAATATACAGAGTAAATCCGTCGCCCTGGAAAAGGGGGCGATTCTGGCGCGTTTCGCTAAC ACTGACGTGCAGCTGCGCGCGCGCGAAGCGATAATCAAAGTCCTTGGCGACGATTATGTGGTGGCGCTCAATCTGGCCCC GGCGACGCCCGCCTGGTTAGCCACATTATCCGCAGAGCCGATGAAGCTCGGTCTCGATCTGCGCGGTGGTGTTCACTTCC TGATGGAGGTGGATATGGACACTGCGCTGGGTAAACTTCAGGATCAAAACATCGACAATCTGCGCAGCGATCTGCGTGAA AAGAGCGTTCCTTACGTTAACGTGCGTAAAACCGGCAATTACGGCCTGGAAATTCGTTTTCGAGATGATAAAACGCGTGA TGAAGCTGTCAGCTATCTGACCACCCGTCACCGCGATATGGTTATCAACAGCAGCGGCAGTAATGCCCTGACGGCGGTCA TGAGCGATGAACGCATGCGTGAAGCCCGCGAATATGCGGTACAGCAGAACATTAATATTCTGCGTAACCGTGTAAATCAG CTGGGCGTTGCGGAGCCTCTGGTTCAGCGTCAGGGCGCCGATCGAATTGTGGTTGAATTACCGGGTATCCAGGATACGGC TCGTGCGAAAGAGATCCTTGGTGCGACGGCCACGCTGGAGTTCCGTCTGGTGAATACCAGCGTCGACGCTACCGCAGCCG CTAACGGCCGCGTACCGGGTGACTCAGAAGTGAAAGACACGCGTGAGGGACAGCCGGTGGTGCTGTACAAGCGCGTGATC CTCACCGGTGACCACATTACCGACTCCACCTCCAGCAACGATGAATACAATCAGCCACAGGTGAATATCTCCCTGGACAG CGCTGGCGGTAATATCATGTCCAACTTCACCAAGGACAGCGTCGGCAAGGCGATGGCAACCCTGTTTGTTGAGTACAAAG ACAGTGGTAAGAAAGACGCTAACGGCCGGGCGATTCTGGAGAAGCATGAAGAGGTGATTAACGTTGCCAATATCCAGTCG CGTCTGGGTAACAGCTTCCGTATTACCGGCATTAATAACCCGAACGAAGCCCGTCAGCTTTCGCTGTTGCTGCGCGCCGG TGCGCTGATTGCGCCTATTCAGATTGTGGAAGAGCGTACTATTGGTCCAACCATGGGTGCGCAGAACATCACTCAGGGTC TGGAAGCCTGCCTGTGGGGGCTGATCGCATCTATCGTCTTCATGGTGGTGTGGTACAAGAAATTCGGCCTGGTGGCGACC AGCGCACTGCTGGCTAACCTGGTGCTGATCGTCGGTATTATGTCGCTGCTTCCGGGCGCTACGCTGACGATGCCCGGTAT TGCCGGTATCGTGCTGACGCTGGCGGTGGCGGTCGATGCTAACGTACTGATTAACGAGCGTATCAAAGAGGAGCTGCGCA ACGGACGTTCCGTACAGCAGGCGATCCATGAGGGTTACAAAGGTGCGTTTTCCAGTATCGTTGATGCCAACGTGACCACG CTGATCAAAGTTATCATTCTGTACGCAGTGGGCACCGGCTCGATTAAAGGGTTTGCCATCACGACTGCGATTGGTGTGGC AACTTCCATGTTTACCGCGATTATCGGCACCCGTGCCATCGTCAACCTGATGTATGGCGGCAAACGCATTAACAAGTTGT CTATCTGA Protein sequence : MLNRYPLWKYIMLIVVLLVGLLYALPNLYGEDPAVQVTGARGSAASEQTLVQIQSALKQDNIQSKSVALEKGAILARFAN TDVQLRAREAIIKVLGDDYVVALNLAPATPAWLATLSAEPMKLGLDLRGGVHFLMEVDMDTALGKLQDQNIDNLRSDLRE KSVPYVNVRKTGNYGLEIRFRDDKTRDEAVSYLTTRHRDMVINSSGSNALTAVMSDERMREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDATAAANGRVPGDSEVKDTREGQPVVLYKRVI LTGDHITDSTSSNDEYNQPQVNISLDSAGGNIMSNFTKDSVGKAMATLFVEYKDSGKKDANGRAILEKHEEVINVANIQS RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGAQNITQGLEACLWGLIASIVFMVVWYKKFGLVAT SALLANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKGAFSSIVDANVTT LIKVIILYAVGTGSIKGFAITTAIGVATSMFTAIIGTRAIVNLMYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-112 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-112 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
