Gene Information

Name : gapD (SJA_C1-13100)
Accession : YP_003544756.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 1293739 - 1294749 bp
Length : 1011 bp
Strand : +
Note : type I

DNA sequence :
GTGGCAACGAAGGTAGCAATCAACGGTTTCGGCCGTATCGGCCGTCTGGTGGCGCGCGCGATCCTGTCGCGGACCGACCA
TGATCTGGAACTGGTGAGCATCAACGACCTGGGCGACGCCAAGTCCAATGCCCTGCTGTTCAAGCGCGACAGCGTCCACG
GCAACTGGGGCGGTGAAGTCAGCGTCGACGGCGACGCGCTGATCATCAACGGCAAGCGCATCGCCGTCACGGCGGAGCGC
GACCCCTCCAAGCTGCCGCATGCCGCGCAGGGCGTGGAAATCGCGCTGGAATGCACCGGCATCTTCGCCGACAAGGCGAA
GGCCAGCGCGCACCTGACCGCCGGGGCCAAGCGCGTCATCATCTCCGCCCCCGCGACCGGCGTCGACAAGACCGTGGTGT
TCGGCGTCAACCATGAGACGCTGAGCGCCGACGACGTGGTGATCTCCAACGCGAGCTGCACCACCAACTGCCTCGCGCCG
CTCGCGAAAGTCCTGCACGACGCCCTGGGCATCGAAAAGGGCTTCATGACCACGATCCACAGCTACACCAACGACCAGAA
CACGCTGGACCAGTTGCACAAGGACATGCGCCGCGCCCGCGCCGCCGCCGTGTCGATGATCCCGACGACCACCGGCGCCG
CCCGCGCCGTGGGCGAGGTGATGCCGGAACTGAAGGGCAAGCTGGACGGTTCCTCGGTGCGCGTGCCGACCCCGAACGTC
TCGGTCGTCGACCTGAAGTTCATCGCCAAGCGTTCGACCAGCGTCCAGGAAGTCAACGAACTGCTGAAGGCCGCTTCGGA
AGCCGGGCCGCTCAAGGGCATATTGGGCTATTCGGACGAGCCGCTGGTGTCCATCGACTATAATGGCGATGCGCGCAGCT
CGACCGTCGACAGCCTGGAAACGGCCGTGATCGACGGCACGCTGGTCCGCGTGCTGAGCTGGTACGACAATGAATGGGGC
TTTTCGAACCGCATGATCGACACCAGCGGCGTCGTGGCGAAGTTCCTCTAA

Protein sequence :
MATKVAINGFGRIGRLVARAILSRTDHDLELVSINDLGDAKSNALLFKRDSVHGNWGGEVSVDGDALIINGKRIAVTAER
DPSKLPHAAQGVEIALECTGIFADKAKASAHLTAGAKRVIISAPATGVDKTVVFGVNHETLSADDVVISNASCTTNCLAP
LAKVLHDALGIEKGFMTTIHSYTNDQNTLDQLHKDMRRARAAAVSMIPTTTGAARAVGEVMPELKGKLDGSSVRVPTPNV
SVVDLKFIAKRSTSVQEVNELLKAASEAGPLKGILGYSDEPLVSIDYNGDARSSTVDSLETAVIDGTLVRVLSWYDNEWG
FSNRMIDTSGVVAKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 3e-65 44