Gene Information

Name : SJA_C1-16010 (SJA_C1-16010)
Accession : YP_003545047.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Resistance
Product : ABC-type transport system ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1587846 - 1588547 bp
Length : 702 bp
Strand : -
Note : ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGCGGCGGATCCGATCATCTCCCTGCGCGGCGTCACCAAGGTCTATGGTGCCGGCCCGACCGCCTTTCAGGCGCTGAA
AGGCATCGACCTCGACATTGCGCAGGGCGATTTCGTGGCGGTCATGGGGCCTTCCGGCTCCGGCAAGTCGACGACGATGA
ACATATTGGGCTGCCTCGACGTGCCCACGGGCGGGGAGTTCCTGTTCAAGGGGCGGCATGTCGAAACGCTCGACCGCGAC
CAGCGCGCCCTGCTGCGCCGCCGCTATCTGGGCTTCGTGTTCCAGGGGTTCAACCTGCTGTCCCGCACCACGGCGCTGGA
GAATGTCGAGTTGCCCCTGCTCTATCGCGGCGAGGACAAGAAGACCAGATATGAGGCCGGCATGGCCGCGCTGGACAAGG
TCGGCCTGAAGGACTGGTGGGACCACACGCCCGCCGAACTGTCCGGCGGGCAGCAGCAGCGCGTCGCCATCGCCCGCGCC
ATCGTGACCCAGCCCGACGTGCTGCTGGCGGACGAGCCGACCGGCAACCTCGATTCCGAAAGATCGGTGGAGATCATGGA
ACTGCTGACCGACCTCAACCGCAATGGCGGCATCACCGTGCTGATGGTGACGCATGAGCCGGACATGGCCGCCTTTGCGC
GGACCATCGTGCATTTCAAGGACGGGCTGGTGGAGCGGGTCGAGCAGGGGGTGACGGCGTGA

Protein sequence : 
MAADPIISLRGVTKVYGAGPTAFQALKGIDLDIAQGDFVAVMGPSGSGKSTTMNILGCLDVPTGGEFLFKGRHVETLDRD
QRALLRRRYLGFVFQGFNLLSRTTALENVELPLLYRGEDKKTRYEAGMAALDKVGLKDWWDHTPAELSGGQQQRVAIARA
IVTQPDVLLADEPTGNLDSERSVEIMELLTDLNRNGGITVLMVTHEPDMAAFARTIVHFKDGLVERVEQGVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-27 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SJA_C1-16010 YP_003545047.1 ABC-type transport system ATPase component NC_012469.1.7686878. Protein 9e-50 51
SJA_C1-16010 YP_003545047.1 ABC-type transport system ATPase component NC_008702.1.4606598. Protein 8e-39 50
SJA_C1-16010 YP_003545047.1 ABC-type transport system ATPase component CP001581.1.gene798.p Protein 3e-37 42