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Name : clpB (SJA_C1-34400) Accession : YP_003546886.1 Strain : Genome accession: NC_014006 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3414865 - 3417450 bp Length : 2586 bp Strand : + Note : ATPase with chaperone activity, ATP-binding subunit DNA sequence : ATGAACCTCGAAAAATTCACTGACCGCGCCAAGGGTTTCCTCCAGTCGGCGCAGACCGTCGCGATCCGGATGAGCCACCA GCGCATCGGGCCGGAGCATCTGTTGAAGGCGCTGCTGGAGGACCAGCAGGGCATGGCGTCCGGGCTGATCAAGGCGGCGG GCGGCGATGCGGGCGTGGCGCTGCGCGAAACCGATGCGGCGCTGGCCAGGGTGCCCGTAGTGTCGGGCAGCGGGGCGCAG CAGACGCCGGGGCTGGACAATGACGCGGTGCGGGTGCTGGATTCGGCCGAGCAGATCGCGGCCAAGGCGGGGGACAGCTT CGTCACGGTCGAGCGGCTGTTGCTGGCGCTGACGCTTGCCACCACCACGGCGGCGGGCAAGGCTTTGGCGGCGGCCGGGG TGAAGGCGGAGGGGCTGAACGCCGCGATCAACGCTCTGCGCGGCGGGCGCACCGCCGATACGGCGGGGGCGGAGGATCGG TACGACGCGCTCAAGAAATTCGCCCGGGACCTGACCGAAGCGGCGCGGGCGGGCAAGCTGGACCCCGTCATCGGCCGCGA TGAGGAAATCCGGCGGACGATCCAGATATTGGCGCGGCGGACCAAGAATAATCCCGTGCTGATCGGCGACCCCGGCGTCG GCAAGACCGCCATCGCCGAGGGGCTGGCGCTGCGCATCGCCAATGGCGACGTGCCCGATACGTTGAAGGACCGCACGCTG ATGGCGCTCGACATGGGGTCGCTGATCGCGGGGGCGAAATATCGCGGCGAGTTCGAGGAACGGCTGAAGGGCGTTCTGGA CGAGGTGAAGGGCGCGGAGGGGCAGATCGTCCTCTTCATCGACGAGATGCACACGCTGATCGGCGCGGGCAAGTCCGAAG GGGCGATGGACGCGGGCAATCTGTTGAAGCCTGCCTTGGCGCGCGGCGAACTGCATTGCATCGGCGCGACGACGCTCGAT GAATATCGCAAATATGTGGAGAAAGACCCGGCCTTGCAGCGGCGGTTCCAGCCCGTCTTCGTGGGCGAGCCGACGGTGGA GGACACCATCTCCATCCTGCGGGGCCTGAAGGAGAAATATGAACTGCACCATGGGGTGCGGATCACCGACGGCGCGATCG TGTCGGCGGCGACCCTCTCCAACCGCTACATCACCGACCGTTTCCTGCCGGACAAGGCCATCGACCTGATGGACGAGGCG GCGTCGAGGCTGCGCATGGAGGTGGAGAGCAAGCCGGAGGAGATCGAGACGCTCGACCGGCGGATCATCCAGCTCAAGAT CGAGCGGGAGGCGCTGAAGAAGGAGACGGACAAGGCTTCGCAGGATCGCCTGGCGGCGCTGGAGGAAGACCTGGCCAATC TGGAGCAGCAGTCAGCCGAACTCACGCAGCGCTGGCAGGCGGAGAAGGACAAGATCGCCGGCGAGAGCAAGCTGAAGGAA CAGTTGGACGCCGCGAGGGTCGAACTGGATCAGGCGCAGCGGGCCGGTGATCTGGCGAAGGCGGGGGAACTGGCTTACGG GCGGATTCCCGAACTGGAGCGCAAGCTGGAAGAGGCGCAGAACGTCACCCAGGGCGCGATGCTGCGCGAGGAAGTGACGC CGGAGGACATTGCTTCGGTGGTCAGCCGCTGGACCGGCATTCCCGTCGACAAGATGATGGAGGGGGAGCGGGAGAAGCTG CTCGCCATGGAAGCGGAACTGGGCAAGCGCGTCATCGGGCAGGCGGAGGCGGTGAAGGCCGTGTCGACCGCCGTGCGTCG GTCGCGGGCAGGCTTGCAGGATCCGAACCGGCCGCTGGGGTCGTTCCTGTTCCTGGGGCCGACGGGCGTCGGCAAGACGG AGTTGACCAAGGCGCTGGCCGGATTCCTGTTCGACGACGACAGCGCGATGGTGCGCATCGACATGAGCGAGTTCATGGAG AAGCATTCGGTCGCCCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGCTATGAGGAAGGCGGCGTGCTGACCGAGGCCGT GCGGCGGCGGCCCTATCAGGTCGTGCTGTTCGACGAGGTGGAGAAGGCGCATGGCGACGTGTTCAACGTGCTGTTGCAGG TGCTGGACGATGGCCGCCTGACCGATGGGCAGGGACGCACTGTGGACTTCACCAACACGATCATCGTGCTGACGTCGAAC CTGGGCAGCCAGTTCATCGCCTCGCTGGCCGATGACGAGCCGGTGGAGAAGGTCGAGGATCAGGTGATGGACATCGTCCG GGCGCATTTCCGGCCGGAATTCCTGAACCGGCTGGACGAGGTGATCCTGTTCCACCGCCTGGGCGCGAGCCATATGGCGC CGATCGTCGACATCCAGGTGGCGCGGATCGGGAAGCTGCTGAAGGACCGCAAGGTGACGCTGGACCTGACCGACGGGGCG CGGGCGTGGCTGGGGCGGGTCGGTTACGATCCGGTCTATGGCGCGAGGCCGCTGAAGCGCGCGGTGCAGCGCTATCTGCA GGATCCGCTGGCGGATTTGATCCTGCGCGGGGAAGTGCCGGATGGCGCGACGGTGAGGGTGGATGAGGGGGATGGAGGGT TGAGGCTGGCCATAGCGTCAGCGTAG Protein sequence : MNLEKFTDRAKGFLQSAQTVAIRMSHQRIGPEHLLKALLEDQQGMASGLIKAAGGDAGVALRETDAALARVPVVSGSGAQ QTPGLDNDAVRVLDSAEQIAAKAGDSFVTVERLLLALTLATTTAAGKALAAAGVKAEGLNAAINALRGGRTADTAGAEDR YDALKKFARDLTEAARAGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGDPGVGKTAIAEGLALRIANGDVPDTLKDRTL MALDMGSLIAGAKYRGEFEERLKGVLDEVKGAEGQIVLFIDEMHTLIGAGKSEGAMDAGNLLKPALARGELHCIGATTLD EYRKYVEKDPALQRRFQPVFVGEPTVEDTISILRGLKEKYELHHGVRITDGAIVSAATLSNRYITDRFLPDKAIDLMDEA ASRLRMEVESKPEEIETLDRRIIQLKIEREALKKETDKASQDRLAALEEDLANLEQQSAELTQRWQAEKDKIAGESKLKE QLDAARVELDQAQRAGDLAKAGELAYGRIPELERKLEEAQNVTQGAMLREEVTPEDIASVVSRWTGIPVDKMMEGEREKL LAMEAELGKRVIGQAEAVKAVSTAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFME KHSVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTVDFTNTIIVLTSN LGSQFIASLADDEPVEKVEDQVMDIVRAHFRPEFLNRLDEVILFHRLGASHMAPIVDIQVARIGKLLKDRKVTLDLTDGA RAWLGRVGYDPVYGARPLKRAVQRYLQDPLADLILRGEVPDGATVRVDEGDGGLRLAIASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-108 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-109 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-109 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003546886.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 2e-124 | 45 |
| clpB | YP_003546886.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 5e-117 | 45 |
