Gene Information

Name : SAR116_0521 (SAR116_0521)
Accession : YP_003550848.1
Strain : Candidatus Puniceispirillum marinum IMCC1322
Genome accession: NC_014010
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 552600 - 553277 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGCCAATGTTGTCACTCGACAAGGTGACCAAGAACTATACGCAAGGCGAAAACAAACTGGAAATTCTTAGTGACGCTAG
TTTAACGGTAGCCTCAGGGGAAATGAAAGCGCTTATCGGGCCTTCGGGTTCAGGCAAATCAACCTTGCTGAATATCGCGG
GTCTTCTCGAAACGCCAACAAGTGGCACCGTTACCATAGCTGGTCATCAAACAGATAAGATTGGGCGCCGTAAGCGAGGC
CAGTTACGCCGCACGCATATTGGTTTTGTGTTCCAGTTTCACCGTCTGCTTCCTGAATTTTCGGCGCTTGAAAATATCAT
GATACCGCAAATGCTGAATGGTCTTGGCCGTGACGAAGCAGCCGCACGCGCTGAACAATTATTACAGATGGTTGGCCTCA
TGAATCGTGATAGCCATCGTCCGGGCTTACTATCGGGTGGTGAACAGCAACGTGTTGCCATCGCACGCTCAGTCGCCAAT
GCACCGCGCGTTCTGCTGGCTGACGAACCAACGGGTAATCTTGATCCGGTTACGGCGGCAGGTGTTTTTGAACATCTATC
GGCGATTGTGCATGGCACCAATACAGCGGCCTTGGTGGTTACGCATAATCAACAGCTAGCGCATGAAATGGACAGCATTT
TGACGCTAAAAAACGGTGTCATCGAAACTATCAACTGA

Protein sequence :
MPMLSLDKVTKNYTQGENKLEILSDASLTVASGEMKALIGPSGSGKSTLLNIAGLLETPTSGTVTIAGHQTDKIGRRKRG
QLRRTHIGFVFQFHRLLPEFSALENIMIPQMLNGLGRDEAAARAEQLLQMVGLMNRDSHRPGLLSGGEQQRVAIARSVAN
APRVLLADEPTGNLDPVTAAGVFEHLSAIVHGTNTAALVVTHNQQLAHEMDSILTLKNGVIETIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAR116_0521 YP_003550848.1 ABC transporter NC_008702.1.4606598. Protein 3e-32 44