|
Name : Amico_0617 (Amico_0617) Accession : YP_003553476.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 649259 - 650395 bp Length : 1137 bp Strand : + Note : TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; KEGG: gme:Gmet_0852 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase DNA sequence : ATGTTTGAATTTCGTTTACAGGCACAATGTCCTGTAACGGGGGCTAGAGCTGGAGAATTCGTGACTCCTCATGGAGTTAT AAAGACCCCCGTTTTTATGCCGGTGGGAACGCAGGCAACAGTGAAAGCAATGGCTCCCTTTGAGCTAGAGGAAATAGGGG CCCAGATCATTCTTTCCAACACATACCATCTCTATCTGCGCCCTGGTGCCGATATAGTGGAGGAGGCTGGAGGACTCCAC TCTTTTATGGATTGGCATCATCCCATTCTTACTGATAGCGGCGGATTTCAGGTCTTTTCTCTCGCTACCCTTAATCGAGT AACTGATGAGGGAGTCGAGTGTCAATCCCATATAGACGGAAGCCGCCACATGATGGATCCTGAATGGTCAATGGAAGTGC AACAGAAGCTGGGAAGCGATATCGCCATGTGCTTTGACCAGTGTCTTCACTATCCAACCACCAAAGAGGAAGCGGAAACT GCTTTAGCCCGTACAACTCGGTGGGCCCGCCGATCTAAGGATGCCCATACAAGAGAGGACCAGGCATTGTTTGGCATCAT TCAGGGGTCTGTATACGAAGATTTGCGGAGGCGCTCGGCAGAAGACATTACATCTATTGGATTTCCAGGCTATGGAATTG GCGGTCTTTCTGTGGGGGAACCTCATCATATTATGTATGAAATGCTTGATGTGCTTCAACACGTCATGCCTTTTGATAAA CCTAGATATCTTATGGGAGTTGGCCATCCCTCCAATCTTGTGGAAGGTGTGGCCCGGGGGGTGGATATGTTTGACTGCGT GTTGCCAACAAGGAATGGAAGGACAGGTACTGTTTTTGTTTCTACAGGGAGGATAAACATTAAAAATCAGGTGTATGCCC GTGATTTTACCCCCCTTGATCCGTCTTGTGACTGTTATGTATGCCGCCATTTTACAAAAGCCTATATACGGCATCTTTAT AAAGCGGGGGAGATTTTGGCTGCTCGTTTATGCAGCTGGCATAATCTTCATTTTCTTATTAAGCTCATGGAAGGTGTTAG AGAGTCTATTTTAAACGGAACTTTCCCTGCTTTCAGAAAGAATTTTATTGAGGTATTTCACGGAGAAGGTGACAGCGTTG AAAACGAAAGTCTATAA Protein sequence : MFEFRLQAQCPVTGARAGEFVTPHGVIKTPVFMPVGTQATVKAMAPFELEEIGAQIILSNTYHLYLRPGADIVEEAGGLH SFMDWHHPILTDSGGFQVFSLATLNRVTDEGVECQSHIDGSRHMMDPEWSMEVQQKLGSDIAMCFDQCLHYPTTKEEAET ALARTTRWARRSKDAHTREDQALFGIIQGSVYEDLRRRSAEDITSIGFPGYGIGGLSVGEPHHIMYEMLDVLQHVMPFDK PRYLMGVGHPSNLVEGVARGVDMFDCVLPTRNGRTGTVFVSTGRINIKNQVYARDFTPLDPSCDCYVCRHFTKAYIRHLY KAGEILAARLCSWHNLHFLIKLMEGVRESILNGTFPAFRKNFIEVFHGEGDSVENESL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 1e-87 | 55 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 1e-87 | 55 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 1e-87 | 55 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 9e-88 | 55 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 9e-88 | 55 |
