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Name : SVI_1588 (SVI_1588) Accession : YP_003556337.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : TrmH family RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1819838 - 1820596 bp Length : 759 bp Strand : + Note : - DNA sequence : ATGCTTAGTAACATTCGCGTAGTACTCGTCGGCACATCCCACCCTGGTAATATTGGCTCTACCGCCCGAGCAATGAAAAC CATGGGGCTCTCTACTTTATATCTAGCTGAACCTAAGGTCCAACCCGATGGCCACTCTGTCGCGCTGGCAGCCGGTGCGT CAGATATATTAAAACATGCGGTGATAGTGGACAGCGTTGCCGAAGCTATTGCCGATTGTAGTCTGGTTATCGCTACCAGC GCGCGTAGCCGTACTTTAGACTGGCCTATGCTTGAACCTAGGGAAGCGGGCGAGAAATTAGTCGCATCAGCACTGGATGG TCCCGTTGCCATCGTATTTGGTCGCGAAAATAATGGCTTGTCCAACGAAGAGTTGCAGAAATGCAATTACCATGTCTCTA TTCCTGCCAACCCAGAATACACCTCTTTGAATCTAGCTCAAGCTGTGCAGATCATCTGTTATGAGGCGCGTGTCGCTCAT TTGGAGCATGAGAAGCGTGAGTTTGAAAAAGGCCGCCCAGCAGATTATGTTGAAGAAAAAATCGAGTATCCGTTTGCCAA GGAACGTGAAAACTTCTTTGGACACTTGGAATCAACCTTATTAGGTACTGGATTCATCGTGAAGCAACATCCAGGTCAAG TCATGACCAAGTTACGTCGCCTATTTAGCCGTGCAAGACTAGAGAGACAAGAGATGAATATCTTGCGAGGTATGTTGACT TCGATTGATAAGAAGATGGCACCAAAAGACGATACATAA Protein sequence : MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSTLYLAEPKVQPDGHSVALAAGASDILKHAVIVDSVAEAIADCSLVIATS ARSRTLDWPMLEPREAGEKLVASALDGPVAIVFGRENNGLSNEELQKCNYHVSIPANPEYTSLNLAQAVQIICYEARVAH LEHEKREFEKGRPADYVEEKIEYPFAKERENFFGHLESTLLGTGFIVKQHPGQVMTKLRRLFSRARLERQEMNILRGMLT SIDKKMAPKDDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 8e-61 | 50 |
