Gene Information

Name : SVI_2282 (SVI_2282)
Accession : YP_003557031.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2616908 - 2617630 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
GTGGAACTTTCAAATATTAATAAGGTGTTTTTAACGGATGAAGTTGAAACTCTCGCGCTAAGCAAGATTAACCTTAAGAT
CAACAAAGGCGAGTACCTTTCTATCACTGGACCATCAGGTTGTGGAAAATCCACCCTATTGTCACTATTAGGTTTGTTGG
ATACCTCTTCAGGTGGAACTTATCATTTGGCCGGTCATGATGCTTCAGATTTAACCCGCGATGAACGAGCACATATACGT
AATAAAGAAATTGGCTTCATCTTCCAGTCTTTCAATTTGATCAGCGACTTAACCGTGGCTGAAAATGTCGAATTACCCCT
GAGTTATCGTCAAGACCTCAGCAAAAATCAAATTGAGTCTTTGGTACGTCAATCCCTGCTTAAAGTAGATATGGCTCATA
GATCTAATCACTTTCCCTCTCAGCTTTCAGGTGGACAACAACAAAGGGTAGCGGTTGCCCGGGCTATTGCGGGCAGTCCG
TCTCTTATATTAGCCGATGAACCTACGGGTAACCTAGATTCGAAAAACGCCAAGGCGGTGATGACCATGCTGGATCAATT
GCATGAAGAAGGTGCGACCATTTGTATGGTGACACATGATCCTCGCTCGGCAGATCGCGCCGAAAGAGTGATAGAAATTT
ACGATGGCAAAATTGTTTCAGATCAAATGAGTAAGAAATCGTCGATTCACACACCAAACCAAGTATCAGCTATCGCTGTT
TAA

Protein sequence : 
MELSNINKVFLTDEVETLALSKINLKINKGEYLSITGPSGCGKSTLLSLLGLLDTSSGGTYHLAGHDASDLTRDERAHIR
NKEIGFIFQSFNLISDLTVAENVELPLSYRQDLSKNQIESLVRQSLLKVDMAHRSNHFPSQLSGGQQQRVAVARAIAGSP
SLILADEPTGNLDSKNAKAVMTMLDQLHEEGATICMVTHDPRSADRAERVIEIYDGKIVSDQMSKKSSIHTPNQVSAIAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-31 48
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-30 46
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-21 43
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-17 42
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-13 41
SVI_2282 YP_003557031.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-21 41