Gene Information

Name : rnhA-1 (SVI_2385)
Accession : YP_003557134.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2737172 - 2737636 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence :
ATGTTAAAACCGCTCTCTATATTTACCGATGGTTCCTGTTTAGGAAACCCAGGCCCCGGAGGTTATGGGGTGGTGATGAA
GTACAAATCACAAGTCAAAGAACTCTCAGATGGATTCCTGTTAACCACCAACAACAGAATGGAATTACTGGCACCAATCA
TCGCATTGGAAGCCTTGAAAGTGCCCTGCAAAATAGTGCTCACGAGTGACAGCCAATATATGCGCCAAGGCATCACTCAG
TGGATCCACGGTTGGAAGAAAAAAGGCTGGCTAACAGCCGCTAAACAACCGGTAAAAAATGTCGACCTCTGGAAACGTCT
AGATGCAGCCACTGCCTCCCATGAAATCGAGTGGCTCTGGGTTAAAGGTCACGCAGGTCATGTAGAAAACGAACGTTGTG
ACACCTTAGCCAGAGTGGCTGCCGAAGCTAAGCCGACTCAGGAAGATATTGGTTACCCGGTTTAA

Protein sequence :
MLKPLSIFTDGSCLGNPGPGGYGVVMKYKSQVKELSDGFLLTTNNRMELLAPIIALEALKVPCKIVLTSDSQYMRQGITQ
WIHGWKKKGWLTAAKQPVKNVDLWKRLDAATASHEIEWLWVKGHAGHVENERCDTLARVAAEAKPTQEDIGYPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-44 68