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Name : SVI_3379 (SVI_3379) Accession : YP_003558128.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Virulence Product : toxin secretion ABC transporter protein, HlyB family Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3825432 - 3827672 bp Length : 2241 bp Strand : - Note : - DNA sequence : ATGTCGAGCAACTTTTTTTCAGGGATCCAATGTTTATCATTGGTTGCCCGTTTTCACCAGATCCCCGCTGAGCCGAGTGC GTTGCTGCGTGAATTTCAATTCAATGATGCTGATGATACGAACTCGCCCTTGGCAGATATTAATTTAGTTCGTGCAGCTA AAAGTCTCGGTTTTAAAGCCAAATTTATTGCAGATACAGCGGATAAGCTTACTGAACACGTATTGCCTGCGATAGCTCGG CATATCGATGGTCACTTTTTCATTATTATCAAAGTGAATGATGATGAAATATTAGTCCAAGATATGGTTGGTACAGTTGC TAACCCAACGACCTATACACATACAGAGCTCAATGCGTGTTGGACAGGTGATCTGTTATTACTATCCAAACGTAGCTCAT TAATAAGTGGGGTAATGACAGAAAGTGCTAAGTTTGGCTTTTCGTGGTTTATTCCTGCACTGATTAAATACAAAATTTAT TTTGGCGATGTTTTTGTGGCGTCTTTTTTTATTCAGTTAGTCGGGTTAGCTTCACCAATATTCTTTCAAGTAGTTATTGA TAAAGTACTGGTGCATAAAGGCATGACCACACTTGATGTGCTTGCAGTTGGCTTTTTTATTGTGATTACTTTTGAAGTGG TGCTTACCGGGCTTCGAACCTATGTGTTTTCCCATACTACTAATCGCGTGGATGTTGAGCTAGGCAGTAAATTATATAAG CACATGCTGTCATTGCCGGTGGCTTACTTTAATAGTCGCCGAGTGGGTGACACAGTAGCCAGAATTAAAGAGCTAGACAG TATTCGGGAGTTTTTAACCGGTTCATCATTAACTGTTGTGCTCGATGTGTTTTTTAGTTTTGTCTTTTTCGGGGTGATGT TCTATTACGCACCGCTACTGACATGGATAATTATTGGCACTATCCCTTTCTACCTTGCTCTTTCATTAATTATTACTCCT AGCTTACGTAAACGACTGAATGAGAAATTCCAGCGAAGTGCTGAGAATCATTCATTTCTAGTTGAATCAGTTAATGGTGT TGAAACCATTAAAGCCATGGCAGTGGAGCCACAACTCCGTAATAAGTGGGAAGATAAACTGGCTGATTACGTTAATATTT CTTTTAAAACGAGTAACTTGAATAACGTATACAGTCAAATTGCAGCCTACATAAACAAGATTGGTGGCTTGTTAACATTA TATTTTGGCTCTATTGCGGTGGTAGCGGGAGAGCTGACCATAGGGCAGTTCATTGCGTTTAATATGTTGTCTCAGCGTGT GAGCGGCCCCATTATGCGTTTAGTAAATTTGTGGCAAGACTTTCAGCAGGCGAATATTTCACTGCAACGTTTAGGTGATG TATTAAATTCTCCTTCTGAGCCCGGTTATAACCCAAACCGTGCCACCTTGCCCGATATCATGGGCAAGGTGGTATTCGAT GATGTCATATTTCGTTATGCCCCGAACCGAGTACCTGTATTAAATAATATCAGCTTTCAGTGCCAACCCGGTGAAGTGAT AGGTATTGTTGGTCGCTCAGGTTCAGGAAAAAGCACCTTAACCAAATTAATACAAAGGTTATATGTACCTGAAGCTGGCA GAGTGCTCATTGACGGTGTTGATTTAGCCATGGTTGAACCTGCATGGCTTCGCAGGCAAGTCGGTGTGGTTTTACAAGAG AACTTTTTGTTTAATCTCACGGTTCGAGAAAACATCGCCCTTGTTGACCCAAGTATGCCAATGGAACAAGTCGTCAATGC GGCACAACTTAGTGGTGCTCATGAATTTATTTTAGAGTTGCCTGAAGGCTACGATACTGTTATTGGCGAGCAAGGCTCGT CATTATCAGGCGGTCAACGCCAGCGTATTGCGATAGCCAGAGCATTGGTCACTAACCCTAAAATACTGATTTTTGATGAA GCCACCAGTGCGCTCGATTATGAATCAGAAAGTATTATTCAAGCTAACATGCGCCGCATTAGCCAAGGCAGAACAGTCTT TATCATTGCTCATCGACTCTCCGCAGTTAAAGATGCTAACCGCATTATGGTGGTAGATAAGGGGAGATTAGTTGAGCAAG GTAATCACCAGCAGTTAGTCAAACAGGGCGGTATATACGCACAACTTCACTCAATTCAAAACCACCACGGTTTAGGTATG GCGGCTAAGCCGCTAGCACAAGCGCCGATAAACCCCATAGTACAAAATAAACCTAATACGGGAGATAAAAATGTCTCATA A Protein sequence : MSSNFFSGIQCLSLVARFHQIPAEPSALLREFQFNDADDTNSPLADINLVRAAKSLGFKAKFIADTADKLTEHVLPAIAR HIDGHFFIIIKVNDDEILVQDMVGTVANPTTYTHTELNACWTGDLLLLSKRSSLISGVMTESAKFGFSWFIPALIKYKIY FGDVFVASFFIQLVGLASPIFFQVVIDKVLVHKGMTTLDVLAVGFFIVITFEVVLTGLRTYVFSHTTNRVDVELGSKLYK HMLSLPVAYFNSRRVGDTVARIKELDSIREFLTGSSLTVVLDVFFSFVFFGVMFYYAPLLTWIIIGTIPFYLALSLIITP SLRKRLNEKFQRSAENHSFLVESVNGVETIKAMAVEPQLRNKWEDKLADYVNISFKTSNLNNVYSQIAAYINKIGGLLTL YFGSIAVVAGELTIGQFIAFNMLSQRVSGPIMRLVNLWQDFQQANISLQRLGDVLNSPSEPGYNPNRATLPDIMGKVVFD DVIFRYAPNRVPVLNNISFQCQPGEVIGIVGRSGSGKSTLTKLIQRLYVPEAGRVLIDGVDLAMVEPAWLRRQVGVVLQE NFLFNLTVRENIALVDPSMPMEQVVNAAQLSGAHEFILELPEGYDTVIGEQGSSLSGGQRQRIAIARALVTNPKILIFDE ATSALDYESESIIQANMRRISQGRTVFIIAHRLSAVKDANRIMVVDKGRLVEQGNHQQLVKQGGIYAQLHSIQNHHGLGM AAKPLAQAPINPIVQNKPNTGDKNVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 2e-174 | 53 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-174 | 53 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-174 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SVI_3379 | YP_003558128.1 | toxin secretion ABC transporter protein, HlyB family | VFG1501 | Protein | 1e-174 | 53 |
| SVI_3379 | YP_003558128.1 | toxin secretion ABC transporter protein, HlyB family | VFG0907 | Protein | 7e-175 | 53 |
| SVI_3379 | YP_003558128.1 | toxin secretion ABC transporter protein, HlyB family | VFG1557 | Protein | 1e-174 | 53 |
| SVI_3379 | YP_003558128.1 | toxin secretion ABC transporter protein, HlyB family | VFG0841 | Protein | 2e-164 | 51 |
| SVI_3379 | YP_003558128.1 | toxin secretion ABC transporter protein, HlyB family | VFG1269 | Protein | 1e-169 | 50 |
