Gene Information

Name : rrsD (SVI_r010)
Accession : -
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 585953 - 587497 bp
Length : 1545 bp
Strand : +
Note : -

DNA sequence : 
TAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGAAACAGAAAGT
AGCTTGCTACTTTGCTGTCGAGCGGCGGACGGGTGAGTAATGCCTAGGGAACTGCCCAGTCGAGGGGGATAACAGTTGGA
AACGACTGCTAATACCGCATACGCCCTACGGGGGAAAGGAGGGGACCTTCGGGCCTTTCGCGATTGGATGTACCTAGGTG
GGATTAGCTAGTTGGTAAGGTAATGGCTTACCAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGA
ACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGC
CGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGCGAGGAGGAAAGGTAGGTAGTTAATAACTGCTTACTGT
GACGTTACTCGCAGAAGAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAGGGGTGCAAGCGTTAATCGGAA
TTACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCAAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTTTG
AACTGGCAAACTAGAGTCTTGTAGAGGGGGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAATACC
GGTGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCAGGTACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG
TAGTCCACGCCGTAAACGATGTCTACTCGGAATTTGGTGTCTTGAACACTGGGTTCCCAAGCTAACGCATTAAGTAGACC
GCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAAT
TCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCATAGAACTCGCTAGAGATAGCTTGGTGCCTTCGGGAACTAT
GAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCC
TTATTTGCCAGCACGTAATGGTGGGAACTTTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGT
CATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTCGCAACGCCGCGAGGTCAAGCTA
ATCCCACAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTGAATC
AGAATGTCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGA
TAGCTTAACCCTTCGGGGAGGGCGTTTACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGG
AACCTGGGGCTGGATCACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-146 88.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-146 88.8
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-146 88.7
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-146 88.7
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-146 88.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-146 88.4