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Name : SVI_0888 (SVI_0888) Accession : YP_003555637.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : LysM domain-containing protein Function : - COG functional category : S : Function unknown COG ID : COG1376 EC number : - Position : 1035556 - 1036479 bp Length : 924 bp Strand : + Note : - DNA sequence : ATGATGAGAATATTGCTGTTGTTCATCTTAAGTGTAATTCCAGGCATTAGTTTGGCCAATGTCTACGATCTGCCGGAAAA AGGCAGTAGTCTCATCGGCGAACTTCAGGAGCACCTGGTACTGAAGGGGGATTATTTTCAGACGATTTCCAAACAGTACA ATGTTGGTATTCTGGAGCTAATGGAATCAAATCCTGGTGTTGACCCATTTTTACCTACTCCTGGCACTAAACTCATTATA CCGACTCAGATGTTGCTTCCCGACGTACCAAGAAAAGGGATAGTGCTCAATCTACCGGAATTGAGACTCTACTACTTTTC TAAAAATGGTAAGCAAGTCCATGTATTTCCTGTGGGTATCGGCCGTGTAGGCCGTGAAACTCCCGAGATGGTCACTAAGA TTAAGGCCAGAATTCCTAATCCAAGTTGGACGCCTCCGGCGAGTATTCGCAAGGAGCATCTGGAACGCGGTGAAATCCTG CCTCCTGTGGTAGCGGCTGGACCGGATAACCCATTGGGTAACTATGCCATGCAGCTTTCTTATGGTGATGGTAGTTACTT GATCCACGGTACGAACAAAGACTTTGGTATCGGCATGCGTGTTAGCTCAGGTTGTGTTCGTCTCAATCCGGATGATATCG AGTGGCTGTTTAATCAGACTAAGTATGGCGATCCTGTGCGGGTGATCAATCAGACGGTTAAGATCTCTACCGAGCCAGAT GGACGTCACATCATAGAGGTGCATTCGGCTTTATCTAAGTCTGACTCAGATATACAGCAAGAAAAACCGGTGACTATGAC TGCGGCTATCGTTAACTTTATTAGCCAGGAAGGCATAGATAGTTTTAAGGCTAATGATGCACTGCTGGCACAAAATGGTT TACCTGTGAATATAGAGCTGCCAGAGCCCAGCCTAAGCGAGTAA Protein sequence : MMRILLLFILSVIPGISLANVYDLPEKGSSLIGELQEHLVLKGDYFQTISKQYNVGILELMESNPGVDPFLPTPGTKLII PTQMLLPDVPRKGIVLNLPELRLYYFSKNGKQVHVFPVGIGRVGRETPEMVTKIKARIPNPSWTPPASIRKEHLERGEIL PPVVAAGPDNPLGNYAMQLSYGDGSYLIHGTNKDFGIGMRVSSGCVRLNPDDIEWLFNQTKYGDPVRVINQTVKISTEPD GRHIIEVHSALSKSDSDIQQEKPVTMTAAIVNFISQEGIDSFKANDALLAQNGLPVNIELPEPSLSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| erfK | YP_853091.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 5e-59 | 44 |
