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Name : lysS (MCRO_0771) Accession : YP_003560368.1 Strain : Mycoplasma crocodyli MP145 Genome accession: NC_014014 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 917923 - 919398 bp Length : 1476 bp Strand : - Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGAGCAATATTAAATATACAGAACAAGAAACAATCAGGAGAAATAAATTAAACTTCTATAAAGAACAAAATATAACTCC TTTTAAACTTATGAAAAAACTTGTAAAATTTGATTATAGTGATGAAATCCAAAATAAATTTTCTGGTTTAACAAGAGAAG AATTAGAAGAAAAAAAAGCAGTAGTTTCAATTTCGGGAAGAATAATTTCTATGAGAGGTCCATTCATTTTAATAAAAGAT TATCATGGAAAAATACAGGTTTACTTCAATAAAAAGGAAGATGAAAAATTAGCTAAACTCGTTGATTCGTTTGACTTAGG AGACATTATTTCAGTTTCTGGAATAGTGATGAAAACACATACAAACGAGATAGCTATACGTTCTCAAAAAATTGAATTGT TAACAAAATCACTAAAACCATTACCTGATAAATATCATGGTTTAACAGATATTGAAGAAAAATATCGTAGAAGATATGTT GATTTAATTGTTAATGAAGATAGTAAAAAAGTTTTTTGAACAAGAACAAAAGTAGTTAGTGAAATAAGAAAATACTTTGA TGAATTAGAATACATGGAAGTTGAAACTCCATTTTTACATGACTATATTTCAGGAGCTGCTGCAAGACCTTTTAAAACTC ATCACAATGCCTTAGATCAAGAATTTGTACTTAGAATAGCAACAGAGATTCCTCTTAAAAAATTATTGGTTGGTGGAGTT GACAGAGTTTATGAAATGGGAAGAATTTTTAGAAATGAAGGAATCGATACAACTCATAATCCTGAATTTACAACTATTGA GTTTTATGAAGCTTACTCTAATCTTGAAGGTATGATGAAGAGAACTGAAGAAGTTTTTAAAAGAATTGCTAAAAGATTAG GTAAATACAAATACATTAATAATGGTGTTGAAATAGATTTGAGTAAACCTTTTAAAAGACTTGATATGGTAGATGCAGTA AGTGAAGCAACTGGTGAAGATTTTAGAAAAATTTCTTTCGAAAAAGCCTGTGATATAGCTAAAAAGAACAAAATTAAAGT TGAAAAATTCCATAAAATAGGTCATATTATTAGTAATTTATTTGAAGAATTAATCGAACACAAATTAATAGAACCAACAT TCGTAACTGGACACCCAATTGAAATTTCTCCACTTTCAGCAAAGATGGACGATCCAAGATTTACAGAAAGAGCCGAACTT TTTATTAATACAAAAGAATACTCAAACATGTACACTGAATTATCAGATCCTATTGATCAACTAGAAAGATTTGAAGCTCA AATTTCAGAAAAAAATGCTGGTAATGATGAGGCAACTGATATAGATTATGATTTTGTTGATGCACTTGAATATGGTATGC CACCCGCTGGTGGTTGTGGAATAGGAATTGATAGATTGGTTATGCTTTTTAGTGAAAAAGAATCAATAAGAGATGTGCTT TTATTCCCAACATTAAAAAGAAAAAGAAATAATTAA Protein sequence : MSNIKYTEQETIRRNKLNFYKEQNITPFKLMKKLVKFDYSDEIQNKFSGLTREELEEKKAVVSISGRIISMRGPFILIKD YHGKIQVYFNKKEDEKLAKLVDSFDLGDIISVSGIVMKTHTNEIAIRSQKIELLTKSLKPLPDKYHGLTDIEEKYRRRYV DLIVNEDSKKVFWTRTKVVSEIRKYFDELEYMEVETPFLHDYISGAAARPFKTHHNALDQEFVLRIATEIPLKKLLVGGV DRVYEMGRIFRNEGIDTTHNPEFTTIEFYEAYSNLEGMMKRTEEVFKRIAKRLGKYKYINNGVEIDLSKPFKRLDMVDAV SEATGEDFRKISFEKACDIAKKNKIKVEKFHKIGHIISNLFEELIEHKLIEPTFVTGHPIEISPLSAKMDDPRFTERAEL FINTKEYSNMYTELSDPIDQLERFEAQISEKNAGNDEATDIDYDFVDALEYGMPPAGGCGIGIDRLVMLFSEKESIRDVL LFPTLKRKRNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-91 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003560368.1 | lysine--tRNA ligase | VFG1668 | Protein | 5e-91 | 45 |
