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Name : glcD (RCAP_rcc02871) Accession : YP_003579007.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Unknown Product : glycolate dehydrogenase, subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.99.14 Position : 3066587 - 3068017 bp Length : 1431 bp Strand : - Note : - DNA sequence : ATGCAAATGCCCCTTCCCAGCGCCAGGGTGCTGGCCGAAAAGGCTTTGATCGTCAAACGCTTGCGGGCAATCCTGCCGCG CGATTCGGTGATCGACGATCCGGCGGAAACCCGGGCCTATGAATGCGATGCGCTCTCGGCCTATCGCTGCGCGCCCCTGG CGGTCGTGCTGCCGCGCACCACCGAAGAAGTCGCGGCCTGCCTGAAGCTGTGCCACGAGATGGGCGTTCCGGTGGTGCCG CGCGGCGCGGGAACCTCGCTTGCCGGGGGCTCGATGCCCTCGGCCGATGCCGTCGTGCTGGGGCTGGCGCGGATGAACCG GGTGCTGGAGGTCGATTACGCCAACCGCTTCATCCGGGTCGAGGCCGGGCGCACGAACCTCTCCGTCACCGGCGCGATCG AGGGCGAGGGCTGGTTCTACGCCCCCGACCCCTCCAGCCAGCTCGCCTGCGCGATCGCGGGCAATATCGGGATGAATTCG GGCGGCGCGCATTGTCTCAAATACGGCGTCACCACCAACAACCTGCTGGGCGTCAAGCTGGTCACCATGCAGGGCGAGGT GGTCGAGATCGGCGGGCCTTATTGTGACGCGGGCGGGTTGGACCTTTTGGGCGTCATCTGCGGCTCGGAAGGGCAATTGG GCGTGGTGACCGAGGCCACTTTGCGCATCCTGCGCCAGCCCGAAGGCGCGCGGCCGGTGCTGATCGGGTTTTCCTCAAAC GAGGTCGCGGGCGCCTGCGTCGCCGACATCATCCGCGCGGGCATCCTGCCCGTGGCGATCGAATTCATGGACCGCCCCTG CATCGAGGCGACCGAGGCCTTTTGCCATGCGGGCTACCCCGATTGCGAGGCGCTCTTGATCGTCGAATGCGAGGGCAGCC CGGCCGAGATCGCCGAGCAGCTGGGCCTGATCCGGCAGATTGCGACGGGCCATGACCCGGTGGAGTTCCGCGAGGCGCAA TCGCCCGAGGAGGCGAAGCGGATCTGGCTGGGCCGCAAATCGGCCTTTGGCGCGATGGGGCAAAAGGGCGATTACATGTG TCTCGATGGGACGATTCCGGTTTCCGCCCTGCCGATGGTGCTGCGCCGGATCGGCGAGATCTCGCGCGACTTCGGGCTGG AGGTCGGCAATGTCTTTCACGCGGGCGATGGCAACATGCACCCGTTGATCATCTACAACGCCAATCAGCCCGGGCAGCAG GAACTGTGCGAGCGGATGGGGGCGGAGATCCTGAAGCTGTGCGTCGAGGCGGGCGGCTGTCTGACCGGCGAACATGGCGT GGGGATCGAAAAGCGCGATCTGATGGCGGTGCAATTCGCGCCCGAGGATCTGGAGGCGCAGATGCGGGTCAAGGATGTGT TTGATCCGAAGTGGTTGCTGAATGCCGCGAAGGTGTTTCCGCTCGATGTCAGTGCGTCGCGGCGGGGGTAA Protein sequence : MQMPLPSARVLAEKALIVKRLRAILPRDSVIDDPAETRAYECDALSAYRCAPLAVVLPRTTEEVAACLKLCHEMGVPVVP RGAGTSLAGGSMPSADAVVLGLARMNRVLEVDYANRFIRVEAGRTNLSVTGAIEGEGWFYAPDPSSQLACAIAGNIGMNS GGAHCLKYGVTTNNLLGVKLVTMQGEVVEIGGPYCDAGGLDLLGVICGSEGQLGVVTEATLRILRQPEGARPVLIGFSSN EVAGACVADIIRAGILPVAIEFMDRPCIEATEAFCHAGYPDCEALLIVECEGSPAEIAEQLGLIRQIATGHDPVEFREAQ SPEEAKRIWLGRKSAFGAMGQKGDYMCLDGTIPVSALPMVLRRIGEISRDFGLEVGNVFHAGDGNMHPLIIYNANQPGQQ ELCERMGAEILKLCVEAGGCLTGEHGVGIEKRDLMAVQFAPEDLEAQMRVKDVFDPKWLLNAAKVFPLDVSASRRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-95 | 46 |
