Gene Information

Name : glcB (RCAP_rcc00839)
Accession : YP_003577011.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 925921 - 928074 bp
Length : 2154 bp
Strand : -
Note : -

DNA sequence :
ATGACGGAACGCGTGGAACGCGAGGGGCTGCAGGTTGCGGCCGAACTGGCGACCTTCATCGAAACGGAGGCGCTGCCCGG
CACCGGGGTCGATCCGGCGCGATTCTGGGCGGGGTTTTCGGCGCTGATCCATGCGTTCGGGCCGCAGAACCGGGCGCTGC
TGGACAAGCGCGACCAGCTGCAGGCGCAGATCGACGCCTGGCACCTGCAACACCGCACGCAGGGCCATGACGCCACCGCC
TATCGCGCCTTTCTGGAAGAGATCGGCTATCTGGTGCCCGAGGGCGCCGATTTCAGCATCGAGACCGGCCCGACCGATCC
CGAGATCGCCCGGGTCTGCGGCCCGCAGCTGGTCGTGCCGATCACCAATGCGCGCTATGCGCTCAATGCCGCGAATGCGC
GCTGGGGCAGCCTTTATGACGCGCTTTACGGCACCGATGCGCTGGGAACGCCGCCCGCCGCGCCCGGCTATGACCCGGTC
CGCGGCGCCAAGGTGATCGCCTGGGCCAAGGACTTTCTGGATGCCGCCTGCCCGCTGGTGGCCGGGTCCTGGGCGCAAGC
CACGCGGCTTTGGCTGCAAGACGGCGGTCTGTTCGCCGAAGTGGCGGGCGAAGAAACCGGGCTGAGGGACCCCGCCCAAT
TCGCGGGCAGTCGCGGCGCCCCCGAGGCGCCCACCGAAATCCTTTTGCGCAACAACGGCTTGCATCTGATCCTGAAGCTT
GACCGCGGCCATCCGATCGGTGCCACCGATCCGCTGGGGCTGGCCGATCTGGTGCTCGAATCGGCGCTGTCCTCGATCAT
GGATTGCGAGGATTCGGTGGCCACCGTCGATGCCGCCGACAAGGTTCTGGCCTATCGCAACTGGCTGGGCCTGATGCGCG
GCGATCTGACCGAAACGGTGACCAAGGGCGGGCGCAGCTTCCCCCGCGCCCTTGCCCCCGATCTGACCTTCACCGCGCCC
GCGGGTGGCCCGGTCACGCTCAAGGGCCGGGCGCTGATGCTCGTGCGCAATGTCGGGCCCCTGATGACCACCCCCGCGAT
CCTGACCCGCAGCGGCGCCGAGGCGCCCGAGGGGCTGATGGATGCGATGGTGACCACGCTTTGCGCGCTCCATGACCTGA
AGCGCGGCGCCAATTCCGCCACCGGCTCGGTCTATGTGGTCAAGCCGAAGCTGCACGGCCCCGAGGAAGTCGCCTTCACC
TGCGCCAGCTTCGCCCATGTCGAGGAAGTTCTGGGCCTGCCCGCCAATACGGTGAAACTGGGCATCATGGACGAGGAACG
CCGCACCTCGGCCAACCTCAAGGAATGCATCCGCGCCGCCAGGGATCGGCTGGCCTTCATCAACTCGGGCTTTCTGGACC
GGACCGGGGACGAGATTTTCACCTCGATGGAAGCCGGGCCGATGGTGACCAAGGCCGAGATGAAATCGCAGCCCTGGATT
TCCGCTTACGAGGATCGCAACGTCGATATCGGCCTGCGCTGCGGGTTGCCGGGCAAGGCGCAGATCGGCAAGGGGATGTG
GGCCGCGCCCGACAACATGGCCGAGATGCTGGCGCAAAAGATCGCCCATCCGATGGCCGGGGCGAATTGCGCCTGGGTGC
CCTCGCCCACCGCCGCCACGCTGCATGCGACGCATTACCACCGCGTCGACGTGAAGGCGCGGCAACGCGAGATCGCACAG
CTGCAACGACCGCTGCGGCTGTTTGATCTGCTGACGATCCCGCTTGCCGTCGGGCGCACCTATTCCGAGGCCGAGATCAC
CGCCGAAATCGAAAACAACGCGCAGGGGATTCTGGGCTATGTGGTGCGCTGGGTCGATCAGGGCATCGGCTGTTCCAAGG
TGCCCGACATTCACGACACCGGCCTGATGGAAGACCGCGCGACGTTGCGGATCAGCTCTCAGGCGCTGGCGAACTGGCTG
CATCACGGCATCGTCGGCGAGCCGCAGGTGATGAAGGCCTTCCGCAAGATGGCGGCCGTGGTCGACCGGCAGAATGCGGG
CGATCCGGCCTATCAGCCGATGGCCCCGAATTTCGACGGGCTGGCGTTCCAGGCCGCCTGCGATCTGGTCTTCCTCGCCC
GGATCCAGTCCTCGGGCTATACCGAGCCGGTGCTGCACCAGCGCCGGGCGCAGGTGAAGGCCGCCAAAGCATAA

Protein sequence :
MTERVEREGLQVAAELATFIETEALPGTGVDPARFWAGFSALIHAFGPQNRALLDKRDQLQAQIDAWHLQHRTQGHDATA
YRAFLEEIGYLVPEGADFSIETGPTDPEIARVCGPQLVVPITNARYALNAANARWGSLYDALYGTDALGTPPAAPGYDPV
RGAKVIAWAKDFLDAACPLVAGSWAQATRLWLQDGGLFAEVAGEETGLRDPAQFAGSRGAPEAPTEILLRNNGLHLILKL
DRGHPIGATDPLGLADLVLESALSSIMDCEDSVATVDAADKVLAYRNWLGLMRGDLTETVTKGGRSFPRALAPDLTFTAP
AGGPVTLKGRALMLVRNVGPLMTTPAILTRSGAEAPEGLMDAMVTTLCALHDLKRGANSATGSVYVVKPKLHGPEEVAFT
CASFAHVEEVLGLPANTVKLGIMDEERRTSANLKECIRAARDRLAFINSGFLDRTGDEIFTSMEAGPMVTKAEMKSQPWI
SAYEDRNVDIGLRCGLPGKAQIGKGMWAAPDNMAEMLAQKIAHPMAGANCAWVPSPTAATLHATHYHRVDVKARQREIAQ
LQRPLRLFDLLTIPLAVGRTYSEAEITAEIENNAQGILGYVVRWVDQGIGCSKVPDIHDTGLMEDRATLRISSQALANWL
HHGIVGEPQVMKAFRKMAAVVDRQNAGDPAYQPMAPNFDGLAFQAACDLVFLARIQSSGYTEPVLHQRRAQVKAAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 56