Gene Information

Name : Cseg_2216 (Cseg_2216)
Accession : YP_003593296.1
Strain : Caulobacter segnis ATCC 21756
Genome accession: NC_014100
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2428015 - 2428719 bp
Length : 705 bp
Strand : -
Note : KEGG: ccs:CCNA_02006 lipoprotein releasing system ATP-binding protein LolD; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTAATCCGATACCGTCTTCGCCAATCTTGGCCCTGCGCGGGGTCGAGCGCGTCTACAAGACCGAGGCCGGGGCGCT
GCCCGTGCTGCGCGGCGTCGATCTGGACGTCTATCCCGGCGAAGTGGTCGGCCTGATCGGTCCCTCGGGTTCGGGCAAGT
CGTCGCTGCTGCATTCGGCCGGGCTGCTGGAGCATCCCGACGCCGGCGCGGTGACGCTCGAAGGCCGCGAGTGCTCCAAG
CTCTCAGAGCGCGTCCGTACGCGCATTCGGCTGGGCACGGTCGGCTTCGTCTACCAGTTCCACCACCTGCTGCCCGAGTT
CACCGCGCTCGAGAACGTGGCCCTGCCGCTCTCGATCGCCGGCAAGAGCCAGCGCGAGGCTGATGCGCGGGCCAAGGAAC
TGCTGGAAGGGCTCGGATTGGGCCATCGGCTGAACCACCAGCCGGCCCAGATGTCGGGCGGCGAGCAGCAGCGCGTGGCG
ATCGCCCGGGCGCTGGCCAACCGGCCCAAGCTGCTGCTGGCCGACGAGCCGACGGGGAACCTCGATCCCGCCACGTCCGC
GGCGGTGTTCCAGTCGCTGTACGAGATCGCGCGCCAGGAAGGCGTCGCCGCCCTGATCGCCACGCACAACATGGAGCTTG
CTCGCTACATGGACCGCGTCCTGGCGCTGAAGGACGGGCACCTCGAGGCCCGCACCTTCTCCTAA

Protein sequence : 
MSNPIPSSPILALRGVERVYKTEAGALPVLRGVDLDVYPGEVVGLIGPSGSGKSSLLHSAGLLEHPDAGAVTLEGRECSK
LSERVRTRIRLGTVGFVYQFHHLLPEFTALENVALPLSIAGKSQREADARAKELLEGLGLGHRLNHQPAQMSGGEQQRVA
IARALANRPKLLLADEPTGNLDPATSAAVFQSLYEIARQEGVAALIATHNMELARYMDRVLALKDGHLEARTFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cseg_2216 YP_003593296.1 ABC transporter NC_008702.1.4606598. Protein 6e-31 45
Cseg_2216 YP_003593296.1 ABC transporter NC_012469.1.7686878. Protein 1e-35 42
Cseg_2216 YP_003593296.1 ABC transporter NC_012469.1.7685735. Protein 3e-29 41