Gene Information

Name : LCRIS_01957 (LCRIS_01957)
Accession : YP_003602429.1
Strain : Lactobacillus crispatus ST1
Genome accession: NC_014106
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1969597 - 1970298 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTACATTAACTTAAAAAATAGTACTAAAATTTACCAATCTGGTGACACAACCATCTATGCCAATAAGAACATTAC
TTTTTCTATCGATAAAGGCGAACTAGTCATTATTCTCGGCTCATCAGGAGCTGGAAAATCTACTTTGCTTAATATTTTAG
GCGGAATGGAACCAAATACAAGTGGCGATGTAATTGTAGCGGGAAAAAATATTGCAAAATATAACGCTAAAGAATTAACT
ACCTATCGGCGCAACGACGTTGGCTTTGTTTTTCAATTTTATAATTTGATTCCCAACTTAACAGCAAAAGAAAACGTTGA
ATTAGCTGCTCAAATTGTCCCCGATGCGATGAGCGCCGCTGATGCCTTGCAGTATGTTGATCTAGGACAGCGAGAAAACA
ATTTTCCCGCTCAACTATCAGGCGGTGAGCAGCAACGTGTGGCAATTGCCCGAGCCATCGCTAAAAAGCCAGCCTTACTT
TTGTGCGATGAGCCCACCGGTGCCCTTGACTATAAAACAGGCAAACGAATCTTAAAAATTTTGCAAAATATGAGCCGGCA
AAATGGCTCGACGGTCTTGATTGTAACTCATAACGCCGCTATTGCCCCAATTGCTGATAAGGTCATCCGTATTCACGATG
GAAGTATTCAAAAAGTCCAGCATAATCTACATCCCGCTGATATTAGTACAATTGAATGGTAG

Protein sequence : 
MAYINLKNSTKIYQSGDTTIYANKNITFSIDKGELVIILGSSGAGKSTLLNILGGMEPNTSGDVIVAGKNIAKYNAKELT
TYRRNDVGFVFQFYNLIPNLTAKENVELAAQIVPDAMSAADALQYVDLGQRENNFPAQLSGGEQQRVAIARAIAKKPALL
LCDEPTGALDYKTGKRILKILQNMSRQNGSTVLIVTHNAAIAPIADKVIRIHDGSIQKVQHNLHPADISTIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCRIS_01957 YP_003602429.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 3e-74 66
LCRIS_01957 YP_003602429.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 5e-37 42
LCRIS_01957 YP_003602429.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 2e-38 41
LCRIS_01957 YP_003602429.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 2e-42 41