Gene Information

Name : rrsB (RIEPE_0346)
Accession : -
Strain : Candidatus Riesia pediculicola USDA
Genome accession: NC_014109
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337291 - 338850 bp
Length : 1560 bp
Strand : -
Note : -

DNA sequence :
TAATCGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAAGCCTAACACATGCAAGTCGTGCGAAATGATGAAAA
TCATTTAGCGGCGGACGGGTGAGTAAGATATGGGAATCTACCTAAAGATGGGGGATAACTATCGGAAACGGTAGCTAATA
CCGCGTAAGCTCTCGATAAGGAAACTGATCGAGAGGAAAGCGGGGGATATGTCATAATCATCGATATACCTCGCGTCTTT
AGATGAGCCCATACGAGATTAGCTAGTAGGTGAGGTAAAAGCTCACCTAGGCAACAATCTCTAGCTGGTCTGAGAGGACG
ACCAGCCACACTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGAGCGAAAGC
TTGATGCAGCTATGCCGCGTGTATGAAGAAGGCCCTAGGGTTGTAAAGTACTTTCAGTTGCGAAGAAAAAGATGAAGATA
ACACCTTCTTCGGATGACGTTAGCAACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC
GAGCGTTAATCGGAATTACTGGGCGTAAAGGGCACGCAGGTGGTAAGTTAAGTTGATTTGTGAAATCCCTGGGCTCAACC
TAGGAAAGCATTCAAAACTAATTTACTAGAGTCTTGTAGGGGGGAATAGAATTCCATGTGTAGCGGTGAAATGCGTAGAG
ATATGGAGGAATACCGATGGCGAAGGCAATTCCCTGGACAAAGACTGACACTCATGTGCGAAAGCATGGGGAGCAAACAG
GATTAGATACCCTGGTAGTCCATGCCGTAAACGATGTCGATTAGGAGGTTGCTACGTTTAAGTAGTGGCTTCCGAAGCTA
ACGCATTAAATCGACCGTCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTG
GAGCATGTGGTTTAATTCGATGCAACGCGAAAAACCTTACCTACTCTTGACATCCAAAGAAATCTGCAGAGATGTAGATG
TGCCTTCGGGAACTTTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACG
AGCGCAACCCTTATTCTTTGTTGCCATCGATTCGGTCGGGAACTCAAAGAAGACTGCCGGTGATAAACCGGAGGAAGGAG
AGGACGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAGAGAGAAGCGAACT
CGTAAGAGCGAGCCAAACTAAAAAAGTACGTCACAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTAGGAATCGC
TAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTTCTCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGT
TGTAAAAGAAGCAGGTAGCTTAACCTGTTCAGGAAAGCGCCTACCACTTTATGATTCATGACTGGGGTGAAGTCGTAACA
AGGTAACCGTAGGGGAACCTGTGGTTGGATCACCTCCTTA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-103 87.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-103 87.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-103 87.1
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-103 87.1
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-119 86.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-119 86.5