|
Name : BC1002_0474 (BC1002_0474) Accession : YP_003604086.1 Strain : Genome accession: NC_014117 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 521411 - 523498 bp Length : 2088 bp Strand : - Note : KEGG: bxe:Bxe_A3992 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAATCGCTACCCCCTCTGGAAATACGCCGTGATGCTGGTGGCCCTGGTCATCGGCCTCGTGTACACGCTGCCCAATCT GTACGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCCACGGTCAGGCTCGACGCCACCACGCTGGCGTCGGTCG AAGCCGCGCTCGCAGGCAATCAGATCAAGCCGACCGCGGTCACGTTCGATAATTCGCAGAACAACGCGAACATCCGCGTG CGCCTGACGGACACGGACACGCAACTGCGCGTCAAAGACCTGCTGCAGAAGTCGCTCAATAGCGACCCGAACGATCCGCA ATACATCGTCGCACTGAACCTGCAAAGCGCGTCGCCGACCTGGATGACCGCGCTGCGCGCACTGCCGATGTACCTCGGTC TCGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGGCCGGCGCACTGAACAAGAAGCTCGATTCGGACGCC TCGGACGTGCGCACGCTGCTGCGCGACAACAACGTGCGCGACGGCGGCGTGAATCGCGTGAACCAGTCGGTGGTGGTGAA TCTGGCCGATCAGGCCACGGCGGACGCGGCACTCAAGCTGCTCGGCCGCGGCGTCAGCGAACTCCAGTGGACCTCGCAGC CGAGCCCCGGCGCGGACGGCGGTGTGCAGCTGGTCGGCACTTTCACGCCGGCCGTGCAGCGCGCGGTGCAGGACGCCGCG CTGAAGCAGAACATCACGACGCTGCATAACCGCGTGAACGAACTCGGCGTGGCCGAGCCGGTGATCCAGCAACAGGGCGC CGACCGCATCGTGGTCGAACTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACGGCGACGCTCG AAGCGCGCCTCGCCGACCCGGTCAACACGCATCCGAACCCGAACGACCCGGTGCCGCCGGGCGACGAACTCTTCACGCAA GGCAATCAGGCGCCGGTGCTGCTGCGCAAGCAGGTGATCTTCACCGGCGACCGCATCATCGACGCATCGGCGGGCTTCGA CGAGCATCAGCGTCCGTCGGTCAACATCCGTCTCGACTCGGCCGGCGGCCGCGCGGTGCGGGCGGTGTCGCGCGACAACA TCGGCAAGCCGATGGCGATGGTGCTGTTCGAACGCGGCAAGGGTGAAGTGCTGACGGTCGCGACCATTCAGTCGGAACTG GGCGACCGCTTCCAGATCACCGGTCAGCCGACCCCGCAAGCGGCCGCCGATCTCGCGCTGCTGCTGCGCGCCGGTTCGCT CGCCGCGCCGATGGAAATCATCGAGGAACGCACGATCGGTCCGAGCCTCGGTGCCGACAACATCAAGAAGGGCTTCCACT CGGTCGTGTGGGGCTTTGCGGCGATCGCCGTGTTCATGATCGCGTATTACATGCTGTTCGGCGTGATCTCGATGATCGGC CTGTCCGTGAACCTGCTGCTGCTGGTCGCGGTGCTGTCGATGCTGCAGGCCACGCTCACGCTGCCGGGTATCGCCGCTAT TGCGCTCGCGCTCGGTATGGCGATCGACGCGAACGTGCTGATCAACGAGCGCGTGCGTGAAGAGTTGCGCCACGGCGCGC CGCCGCAACTGGCCATCCAGAACGGCTACGCGCACGCGTGGGCGACGATTCTCGACTCGAACGTGACCACGCTGATCGCC GGCCTCGCGCTGCTCGCATTCGGCTCGGGTCCGGTACGCGGTTTCGCGATCGTCCACTGTATCGGCATTCTGACGTCGAT GTTCTCGGCGGTGTTCTTCTCGCGCGGCCTCGTCAACTTTTGGTACGGCGGCAAGAAGAAGCTGAAGTCGCTGTCGATCG GCCAGGTGTGGCGTCCGCAAGCGGCCGCCGGCTCGGCTGCTTACGCCGGCGGCCTCGGCAGCAGCGACGCCGCGACCGAT ACCGCGCAGGCCATCGCCACGGCGAAGGCGAGCGCGAAGGCAAGCTCGAAGGCACCGGCCGCAGCCGGCGCGCAGGGTCG CGCGAAGCCGACCGTGCGCCGCCGCAATGCGCCGGGCACGCCGACGTCGAATGGCTCGACGCCGCAGAAACCGGGTTCAT CCCGCTGA Protein sequence : MNRYPLWKYAVMLVALVIGLVYTLPNLYGEAPAVQVSSGKATVRLDATTLASVEAALAGNQIKPTAVTFDNSQNNANIRV RLTDTDTQLRVKDLLQKSLNSDPNDPQYIVALNLQSASPTWMTALRALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDA SDVRTLLRDNNVRDGGVNRVNQSVVVNLADQATADAALKLLGRGVSELQWTSQPSPGADGGVQLVGTFTPAVQRAVQDAA LKQNITTLHNRVNELGVAEPVIQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARLADPVNTHPNPNDPVPPGDELFTQ GNQAPVLLRKQVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRAVSRDNIGKPMAMVLFERGKGEVLTVATIQSEL GDRFQITGQPTPQAAADLALLLRAGSLAAPMEIIEERTIGPSLGADNIKKGFHSVVWGFAAIAVFMIAYYMLFGVISMIG LSVNLLLLVAVLSMLQATLTLPGIAAIALALGMAIDANVLINERVREELRHGAPPQLAIQNGYAHAWATILDSNVTTLIA GLALLAFGSGPVRGFAIVHCIGILTSMFSAVFFSRGLVNFWYGGKKKLKSLSIGQVWRPQAAAGSAAYAGGLGSSDAATD TAQAIATAKASAKASSKAPAAAGAQGRAKPTVRRRNAPGTPTSNGSTPQKPGSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-90 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-90 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-90 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-90 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 42 |
