Gene Information

Name : BC1002_5600 (BC1002_5600)
Accession : YP_003609030.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Unknown
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 37497 - 38867 bp
Length : 1371 bp
Strand : +
Note : PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR1487 transporter

DNA sequence :
ATGCCCTCGCACAACCCGACAGGCGCGTCCCGCCGGCCCGCTACGGATCGATCCCGTACCCTCGCTTCAACCACAACGAC
CGAGTTCGAAAGCGCGACTTACGCGAAAGTGACCTGGCGTCTGCTGCCGTTTCTCTTCATCTGCTATGTCGCGGCCTATC
TGGATCGCGTCAACGTGGGATTCGCCAAGCTGCAAATGCTCAGCGACCTGAAGTTCAGTGAGTCGGTGTACGGGCTTGGC
GCAGGGATTTTCTTCATCGGCTATTTCGCGTTCGAGGTGCCGAGCAACATTCTGCTGCATCGCGTGGGTGCACGCGTGTG
GATCAGCCGGATCATGGTGACATGGGCGTTGGTGTCGGCGGCGTCGTTGTTCGTGAAGACGCCCGCCATGTTCTATACGA
TGCGCTTTCTCCTCGGCGTCGCCGAGGCGGGGTTCTTTCCGGGTATCGTGCTTTATCTGACGTACTGGTATCCGTCGGTG
CGTCGTGGCCGCATGAACGCGCTTTTCATGATCGGCATTCCGGTGGCTGGCGTACTCGGCGGCCCGCTGTCGGGCGGGAT
CATGCAGGCGTTCAACGGCGTGCGTGGTTTGTCCAACTGGCAATGGCTATTCCTGATCGAAGCGCTTCCGTCACTGGTGC
TCGGCATCGTCACGCTGTTCGTGCTGCCAAACGGCATCCGCGCCGCGTCCTGGCTCGACGAACGGCAAAAGCAGCTTCTC
GAGGACAACATTGCACGCGACGGACACGCAGGCGCTGAGGCGTCGCTGAGGAGCATCGTGTCGAATGGCCGTGTCTGGCG
GCTCGCGGCGATTTACTTCTGTTGCATGATGGGTCTTTACGGCGTGAGCTTTTATCTGCCGACGCTCATCAAGGCGGCGG
GCGTCAAGGAAGCGCTGGATGTCGGCATGCTGACTGCGGTGCCTTATGCGGTCGCGATCGTGTCGATGATTCTGGTCGCG
CGCAGTTCCGACCGTCGCAACGAGCGCCGCTGGCATCTCGCGATGGCGGCCGTTGCCGCGGCAGCGGGCTTTTACGCAAG
TACGCTCCATGCGGGCAATCTCGCGCTCGTATTGTTCACGCTGTCGCTCGGCACCGCTGGCGTGTTGTCGATGATGCCGG
TCTTCTGGACGTATCCGAGCAGCGTGCTGACCGGCACGGCCGCCGCCGCCGGAATCGCGATGATCAATTCGATCGGCAAT
CTCGCCGGATTCGTCAGCCCGTCGATTATCGGATGGATGAAGGACGTGACGCACAGCACCAACGCCGGTCTGATGGTCGT
CGCGGGGGCGCTGTTCGTCGGTGCGGTGCTGGCGCTGACTCAGCGCGCGCCGTCCGTAACGACACCGGCGGCGCAGCCGA
GCCGGGCCTGA

Protein sequence :
MPSHNPTGASRRPATDRSRTLASTTTTEFESATYAKVTWRLLPFLFICYVAAYLDRVNVGFAKLQMLSDLKFSESVYGLG
AGIFFIGYFAFEVPSNILLHRVGARVWISRIMVTWALVSAASLFVKTPAMFYTMRFLLGVAEAGFFPGIVLYLTYWYPSV
RRGRMNALFMIGIPVAGVLGGPLSGGIMQAFNGVRGLSNWQWLFLIEALPSLVLGIVTLFVLPNGIRAASWLDERQKQLL
EDNIARDGHAGAEASLRSIVSNGRVWRLAAIYFCCMMGLYGVSFYLPTLIKAAGVKEALDVGMLTAVPYAVAIVSMILVA
RSSDRRNERRWHLAMAAVAAAAGFYASTLHAGNLALVLFTLSLGTAGVLSMMPVFWTYPSSVLTGTAAAAGIAMINSIGN
LAGFVSPSIIGWMKDVTHSTNAGLMVVAGALFVGAVLALTQRAPSVTTPAAQPSRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 3e-86 53
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 3e-86 53
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 3e-89 53
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 3e-86 53
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 3e-86 53