Gene Information

Name : BC1002_6241 (BC1002_6241)
Accession : YP_003609612.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 698423 - 699490 bp
Length : 1068 bp
Strand : +
Note : KEGG: bgl:bglu_2g01560 cytoplasmic protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305

DNA sequence :
ATGGAGGGGACTTTTGCGAGCGCCGTCGCGCCGACGCGATCATCGCTCGATCCGCAATCGCTCGACGCGTGGTTCGATCC
CGACACGCCGTGGCAGTCCGGCTTCCTGAGCCTGCTGCGCGCGATCGCCGCGCGTGACCCGCTGATGCCGTTGCCGGGCA
CCGCGAGCCTGCCGCACGAAGAGCCGTTCCGGATTGGTCAGCAGCCCACACTGGCCTTTGCGCCGCGCGAAATCGCGTCG
CTCGGCACGCGAGACGGTCGGCTCGATGTGCGGTTGTTCGGGCTCGGCCTGTGGGGGCCGCAAGGGCCGCTGCCGCTGCA
TATGACGGAGCTGGCTCACAGTCGGGTGGAAAGCCACCAGGATCATGCGCTCGTCGGGCTCGTCGATCTGTTCCATCACC
GCGCGCTGTCGCAGTTTTATCGCGCGTGGGCATCGGGGCAAGCCACCGCGTCGCTCGACCGTGCCAGCGACGAAACGTTT
TCGTTCTACGTCGCCAGTCTGATCGGCGTCGAGCCGGCCGAGGCGAAGCAGTCCTGCCTGCCCACGCACTCGCGCTATAG
CGCGGCGGCGCACCTCGTGCGGGAGGCGCGAACGCCGCACGGCATCGCGGCGACGCTCTCGCATTACTTCGGTGTTCCGA
TGACCATCGAAGAATTCGTGCCGCACTGGATCCACCTGTCCGCATCGGAACATACGAGGCTGGGGGTGCCGGGGCCCGCG
GCGATCATCGGTGAATGCGCGCAGCTTGGCGAGGCCATTCCCGACCGGCAACACAAGTTCCGGCTCGTCGTGGGTCCGCT
CGACCTCGATCAGTATCTGCGCCTCACGCCGCACGGCGAGGACTTGCCGACGTTCGTCGAATGGGTGCGGGCCTTCGTCG
GCCATGAATACGCGTGGGAGGTCAGGCTGCTCGTCAACCCACGTGCGGCGCCGGCTGCCTGCATCGGCACGTCGCAGAGA
CTCGGCTACTCGACATGGCTCGGTGATTCCGTCGGCGACCTTCCCGTCGTCGGGATGGTTTTCGAACCTGAACAGTACAA
CGACCGACCCCGGAGTTCCTTCGCATGA

Protein sequence :
MEGTFASAVAPTRSSLDPQSLDAWFDPDTPWQSGFLSLLRAIAARDPLMPLPGTASLPHEEPFRIGQQPTLAFAPREIAS
LGTRDGRLDVRLFGLGLWGPQGPLPLHMTELAHSRVESHQDHALVGLVDLFHHRALSQFYRAWASGQATASLDRASDETF
SFYVASLIGVEPAEAKQSCLPTHSRYSAAAHLVREARTPHGIAATLSHYFGVPMTIEEFVPHWIHLSASEHTRLGVPGPA
AIIGECAQLGEAIPDRQHKFRLVVGPLDLDQYLRLTPHGEDLPTFVEWVRAFVGHEYAWEVRLLVNPRAAPAACIGTSQR
LGYSTWLGDSVGDLPVVGMVFEPEQYNDRPRSSFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 4e-71 50