|
Name : secD (lpa_02918) Accession : YP_003619315.1 Strain : Legionella pneumophila 2300/99 Alcoy Genome accession: NC_014125 Putative virulence/resistance : Unknown Product : protein export protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2343645 - 2345501 bp Length : 1857 bp Strand : - Note : COG0342, SecD, Preprotein translocase subunit SecD [Intracellular trafficking and secretion] DNA sequence : ATGCAAAATAAATATCCTCTATGGAAAAATCTAATGCTGATAGTGATTGCAGTCATTGGATTTATTTACGCTATACCGAA TTTGTATACGGAAAATCCCGTTGTTCAAATTTCTGCGGGTACAGATGAAGATACAGAGACAATAAAAAATCAGGTAGAGT CCATATTAAAAAATGCCAATATGGATTATAAATCCCTGGTTGTGGAGAGGGATGGGGTAGAGGTAGTATTTTCTTCTACT GATTCTCAATTATTAGCTCGTGATGTTATCAAGAATAGCCTGGGATCTGATTACACAGTGGCTTTGAATTTAGCGCCTTC CACACCAGCTTGGCTTGAAGCAATTCATGCTGACCCTATGAAGCAAGGGTTGGACTTAAGAGGCGGTGTTCATTTTCTTC TTGAAGTGGATGTCGAGAGTGTTATAAGTCGGCGTTATGAAGGAATAATGAAAAATATTGGCCAAGAATTACGTGAAGCA GGTATTCGTTATTCAGGCATACGTTATTTATCAGATAAAGGGATTGAATTGCGTTTCAGAGATTCTGACTCAATGGAAAA TGCTTTAGTTGAGTTAAGACAAAAAATATCTGATGTGGTTTTTGTTAAAACTAAAACACAAAATTCAATTTTAGGCGCCA TTTCTCCAGCAGAATTAAATTCCATAAGACAAAATACTATTGAGCAGACAATGAGTATCTTGAGAAATCGTGTCAACGAG CTCGGAGTTGGTGAAGCTGTCGTACAACAACAAGGGGCGACTCGAGTCGCCGTAGATTTGCCAGGCATTCAAGACGCGGC CAGAGCAAAACAAATACTTGGTGGTACTGCTACTTTAGAATTTCATTTGGTTGATCAGGAAAATGACCCTTTCATTGCAA AGCAAACCGGCGTAGTTCCTGTCAATGATAAGCTGTATATGATGGATGGTCATCCTATCTTATTAAAGAGACAGGTCGTT TTAAGTGGTGACTCTATTACGTCAGCAGTGTCCAGTTTTGATCAACAAACGGCTTCTCCATCTGTTCAAATTCAATTGGG TGGCGGGGGCGAGAGCTTGTTTACTAAAGTTACGCGTGAAAATATCGGTAAGCGCATGGCGATCGTTTTTGTGGAAACCA AAACGACTACACAAACAATTAATGGCGAGGAAAAACGAGTAACAAAGAAAGAAGAGCGAGTTATTAGTGCGCCAGTGATT CAAAATGCTTTAGGCAGCAATTTCCAGATTACCGGACTGACTGATAGCAAAGAAGCAAGTAATCTGGCTTTATTATTAAG AGCTGGCGCTTTACCTGCTGCAATCTATCCTGTTGAAGAGCGTACCGTTGGCCCAACTCTTGGAAAGGAAAATATTCGCC GAGGACTTATTTCCCTGGAAGTTGGTATGGGTTTAATTTTGGTACTAATGCTCGTGTATTATCATTTTTTTGGTTTAATT GCTGATATTGCATTGATGCTGAATTTAGTTTTTCTTTGCGCATTGTTGTCCATAATTGATGCGACACTGACTTTACCGGG AATTGCGGGGATTGTTTTGACCGTGGGCATGGCTGTTGATGCCAATGTCCTGATTTATGAGCGGATTAGAGAGGAGTTGC GCAATGGATTGTCTCCTCAAGCTGCGATTCATGCAGGATATGAGCGAGCATTTTCAACTATATTGGATGCCAACGTGACT ACTTTAATTGTAGCTATCATTTTATTTGCGGTGGGCACAGGACCGGTGCGCGGGTTTGCGGTTGTCCTTTCTCTGGGTTT GTTAACTTCTATGTTAACTGGTATTACTTACACCAGAGCTATTGTGAATTGGTATTATGGTGGGCGTAATGTCAAAAAAT TATCTATAGGCATATAA Protein sequence : MQNKYPLWKNLMLIVIAVIGFIYAIPNLYTENPVVQISAGTDEDTETIKNQVESILKNANMDYKSLVVERDGVEVVFSST DSQLLARDVIKNSLGSDYTVALNLAPSTPAWLEAIHADPMKQGLDLRGGVHFLLEVDVESVISRRYEGIMKNIGQELREA GIRYSGIRYLSDKGIELRFRDSDSMENALVELRQKISDVVFVKTKTQNSILGAISPAELNSIRQNTIEQTMSILRNRVNE LGVGEAVVQQQGATRVAVDLPGIQDAARAKQILGGTATLEFHLVDQENDPFIAKQTGVVPVNDKLYMMDGHPILLKRQVV LSGDSITSAVSSFDQQTASPSVQIQLGGGGESLFTKVTRENIGKRMAIVFVETKTTTQTINGEEKRVTKKEERVISAPVI QNALGSNFQITGLTDSKEASNLALLLRAGALPAAIYPVEERTVGPTLGKENIRRGLISLEVGMGLILVLMLVYYHFFGLI ADIALMLNLVFLCALLSIIDATLTLPGIAGIVLTVGMAVDANVLIYERIREELRNGLSPQAAIHAGYERAFSTILDANVT TLIVAIILFAVGTGPVRGFAVVLSLGLLTSMLTGITYTRAIVNWYYGGRNVKKLSIGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-110 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-109 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-110 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-110 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-110 | 47 |
