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Name : secD (THI_0100) Accession : YP_003622726.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 97563 - 99533 bp Length : 1971 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGAATCGCTATCCCTGGTGGAAATATCTCATCATGGTCGTCGTCCTGGTGGTTGGCGTGGTGTATGCGCTGCCCAATCT GTACGGCGAATCGCCCTCAGTGCAGATTTCAAGCACCAACGGCGGCAAGGTGGACAACGCCCTGCTGCTCAAAGGCGAGC AGATTCTGGACGCGGCTAACCTCAAGCCCGATTCGGCCGACTTCAACGGCGCCACGGTCAACTACCGCTTCAGCAACACC AGCGTGCAGCTCAAGGCGCGCGATGTGCTGGCCAAGGCGCTCAACCCCAATGCGGACGATCCGCGGTATGTGGTCGCGGT CAATCTGCTGTCGCGTTCGCCCGCGTGGCTGACGGCGCTCAACGCCAATCCCATGTACCTCGGTCTCGACCTGCGCGGGG GCGTGCACTTCCTGCTGCAGGTGGACATGCAGGCGGCCGTGCACAAAAAGCTCGACTCGATTTCCGGCGAGCTGCGCCGC GATTTGCGCGACAAGGACGCGCGCTACACCAAGCTCGAACGCGTGGGCGACACCCTTCAGGGCGTTTTTGTCGATGCCAG CGCACTGAACACGGCCAAGGAACTCATCACCCGTCAGCATCCCGATTTGCAGCTGGCCCCGCAAGCGCCCGCAGGCTCCT ACAGCCTCAGCGCCAGTCTGACGCCTGCCGCCGTGTCGCAGGAAGAAGACTACGCCATCAAGCAGAACATCCAGACCCTG CACAACCGCATCAACGAACTCGGCGTGGCCGAGCCCATCATCCAGCAACAGGGTCGCGACCGCGTGGTGGTCGAGCTGCC CGGTATTCAGGACGTGGCCCGGGCCAAGGACATTCTCGGCCGCACCGCCTCACTCGAAGTACGCATGGTGGACGACAGCG CCGCAGCTCAGGCCGCGCTGGCCGGGCAGGGCCCGCTGCCCGCTGGCGACCAGATCTTTCCGGACCGCGATGGCGGCAAA CTGGTGGTCAAGCGCGACGTGCTGCTGACCGGCGACAACCTCACCGACGCCCAGCCCGGCTTCGACCAGCAGACCAACGA GCCCGCGGTGTTCCTCACCCTCGACTCCAAGGGCTCCCGCATCTTCCAGCAAGTCACGCGGGAGAACGTGGGCAAGCGCA CCGCCATGATTCTGTTCGACCGCGGACGCGGCGAAATTATCACCGCCCCGGTGATCCGCAGCGAAATCGCCGGCGGCCGG GTACAGATCTCCGGCCACATGACCGTGCAGGAAGCCAACGACACCGCGCTGCTGCTGCGCGCCGGCGCTCTGGCTGCGCC GATGAACATCATCGAAGAGCGCACCGTCGGCCCCAGCCTGGGGCAGCAGAACATCAGCCAGGGCTTCCATTCGGTGACCT GGGGCTTTGTTGCCATCGTCATTTTCATGTCGATCTACTACATGTTCTTCGGCGTGGTGTCGTCCATCGGTCTGGCGGTC AACCTGCTGCTGCTGGTGGCGGTGCTCTCCATGTTGCAGGCCACACTCACTCTGCCCGGCATCGCGGCCATGGCGCTGGC GCTGGGTATGGCCATCGACTCGAACGTGCTGATCAACGAACGCATCCGCGAGGAACTGCGCAATGGCGCCAGTCCGCAAA ACGCCATTTTCCACGGCTACGAGCGCGCTTGGGCCACCATCTTCGACTCCAACGTCACCACGCTGATTGCCGGGGTCGCG CTGCTGATCTTCGGCTCGGGCGCCATCCGGGGATTCGCCGTGGTGCACGTGCTGGGCATTCTCACCTCGATGTTCTCGGC GGTGTTCTTCTCGCGCGGCATCATCAACCTCTGGTATGGCCGCAAGCGCCGCCTGCACAGCATCTCCATCGGCCAGATCT GGAAGCCGCAAGCGGCTGAAGGCGCGGCGGGAGCGCTGTCGTCCGGCGCCGCGAGTGACGCGGTGAAAGCTGGAAAGCCG CTGGACGCACCCACACCGCGCACCACCAAGCCGCGCCGCAAGGTGCATTGA Protein sequence : MNRYPWWKYLIMVVVLVVGVVYALPNLYGESPSVQISSTNGGKVDNALLLKGEQILDAANLKPDSADFNGATVNYRFSNT SVQLKARDVLAKALNPNADDPRYVVAVNLLSRSPAWLTALNANPMYLGLDLRGGVHFLLQVDMQAAVHKKLDSISGELRR DLRDKDARYTKLERVGDTLQGVFVDASALNTAKELITRQHPDLQLAPQAPAGSYSLSASLTPAAVSQEEDYAIKQNIQTL HNRINELGVAEPIIQQQGRDRVVVELPGIQDVARAKDILGRTASLEVRMVDDSAAAQAALAGQGPLPAGDQIFPDRDGGK LVVKRDVLLTGDNLTDAQPGFDQQTNEPAVFLTLDSKGSRIFQQVTRENVGKRTAMILFDRGRGEIITAPVIRSEIAGGR VQISGHMTVQEANDTALLLRAGALAAPMNIIEERTVGPSLGQQNISQGFHSVTWGFVAIVIFMSIYYMFFGVVSSIGLAV NLLLLVAVLSMLQATLTLPGIAAMALALGMAIDSNVLINERIREELRNGASPQNAIFHGYERAWATIFDSNVTTLIAGVA LLIFGSGAIRGFAVVHVLGILTSMFSAVFFSRGIINLWYGRKRRLHSISIGQIWKPQAAEGAAGALSSGAASDAVKAGKP LDAPTPRTTKPRRKVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-88 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-88 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-88 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-88 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-88 | 41 |
