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Name : secD (MCR_1008) Accession : YP_003627166.1 Strain : Moraxella catarrhalis RH4 Genome accession: NC_014147 Putative virulence/resistance : Unknown Product : protein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1007322 - 1009199 bp Length : 1878 bp Strand : + Note : - DNA sequence : ATGCACTACCCTGCTTGGAAATATATATTAATTGTTGTGGTGCTATTTATCTCTGGCATCTACGCATTACCCAACCTATA CCCTGATGAGCCTGCTGTGCAAATTACAGGCGCGAGTGCAGGCACACAATTAACTCAAGATGTGCTAACACAAGCTGAAG GTCTGCTGACACAGGCAGGATTAAATCACCATAATGGTCGCTTTGAAAATAACAGCGCATTACTTCGTTTATCAAATGCT GAAGATCAGCTTAAGGCACAAGAAGTGCTGCGCCGAGACTTGGGCGAACAGTATGTAGTCGCACTCAATTTGGCACAAAC CACCCCTGAATGGCTGCGTAATTTGGGTGCAGCTCCCATGAAATTGGGCTTAGATTTGCGTGGTGGTGTGAGATTTGTGT TAGAAGTTGATATGGCAAAAGCACTTGAACAGCGTCTTGCAACTGCCAGTCAAGATGTACGCCGTACACTGCGTGGTGAG CAAATCCCTGTTCAAAGCCTGCGTATCACTGATAATGGCATGGTGCTTACCTTTATAAATACAGATGATCGTGGACGTGC TCAATCTATCCTACAAAATCAAGTGGGTGCAGACTTTGCATTACGCCCCTTTGCTGATACTGAAGGTGCGGCACTTGAGC TGACTTATACTGATGCCAAAATTCAAGAGATTAATGAATATGCTGTTGGTCAAAACTTAACCACACTAAGAAATCGTATC AATGAGCTTGGCGTGGCTGAAGCATTGGTACAATCTCAAGGCACCAACCGCATCGTCGTTGAACTGCCTGGTGTACAAGA CACCGCAGAAGCCAAACGGGTTTTGGGTCGTACCGCCAATCTTGAGTTTCGCATGGTGAGCGAACACGATATGAATTATG CAGGCGGTATTCCACCTGCAGGTACCGAAGCTTTTGCATTTGGTTCTTTGGACGGTCAGCCCATGTTGCTTGAACGCCAA GCCATCATCACAGGCGAGCGTGTTCAAGGGGCACAGTCGGGTTTGGATGAGAATGGACGCCCACAGGTAAATATTACCCT AGATACAGCAGGCGGCAGACTCATGCAAAATGCCACACGCACTGCTGTGGGCAAGCAGATGGCCGTGCTATTTATTGAAA ATAAGCAAAAGGTCAGCTTCCAAGAAGATTCATCAACTGGCGAGCTTGTTGAGGTGCGTACACCTTATACCGAGTCACGC ATTATTAACCGTGCTACCATTCAGGCGGTACTTGGTTCTTCATTTGTGATCACAGGCTTAGATTCAGATGCAGAAGCAGG CGAGCTTGCGTTACTGTTACGCTCAGGCGCGTTAGCGGCACCGATGTACTTTGTTGAAGAGCGAACCATTGGCCCATCTT TGGGTCAAGATAATATCGATAAAGGATTATTCTCTACACAGGTTGGCTATCTGTTGGTATTTTTATGGATGATTGTGTTT TATCGTGCATTTGGTGTGATTGCAAATATTGCTTTAGCCTTTAATGTCATTATCATGGTTGCCATTATGTCCATTTTAGG ATCATCGCTCACCCTACCTGGTATTGCTGGGATTGTGTTGACCATTGGTATGGCGGTTGATGCCAATGTGCTAATTTTTG AGCGTATTCGTGAAGAGCTTGCCAATGGTACTCGTGCAAAATCCGCCATTGTGGCAGGTTTTGATCGTGCATTTAGCTCA ATTTTTGATGCCAATATCACCACGCTATTAATTGCATTTATCTTATTTGCCATCGGAACAGGACCAATCAAAGGTTTTGC AATCACGCTTGCAATTGGTATTATCAGTTCTTTGTTTACTGCGATTTTAGTCACTCGTGCCATGATTCAAATTTGGTATG GTCATCGCAAAAACTTAACCAAACTTAGCATCGGTTAG Protein sequence : MHYPAWKYILIVVVLFISGIYALPNLYPDEPAVQITGASAGTQLTQDVLTQAEGLLTQAGLNHHNGRFENNSALLRLSNA EDQLKAQEVLRRDLGEQYVVALNLAQTTPEWLRNLGAAPMKLGLDLRGGVRFVLEVDMAKALEQRLATASQDVRRTLRGE QIPVQSLRITDNGMVLTFINTDDRGRAQSILQNQVGADFALRPFADTEGAALELTYTDAKIQEINEYAVGQNLTTLRNRI NELGVAEALVQSQGTNRIVVELPGVQDTAEAKRVLGRTANLEFRMVSEHDMNYAGGIPPAGTEAFAFGSLDGQPMLLERQ AIITGERVQGAQSGLDENGRPQVNITLDTAGGRLMQNATRTAVGKQMAVLFIENKQKVSFQEDSSTGELVEVRTPYTESR IINRATIQAVLGSSFVITGLDSDAEAGELALLLRSGALAAPMYFVEERTIGPSLGQDNIDKGLFSTQVGYLLVFLWMIVF YRAFGVIANIALAFNVIIMVAIMSILGSSLTLPGIAGIVLTIGMAVDANVLIFERIREELANGTRAKSAIVAGFDRAFSS IFDANITTLLIAFILFAIGTGPIKGFAITLAIGIISSLFTAILVTRAMIQIWYGHRKNLTKLSIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-144 | 54 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-144 | 54 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-144 | 54 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-143 | 54 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-144 | 54 |
