Gene Information

Name : Tint_0121 (Tint_0121)
Accession : YP_003641864.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 136058 - 136354 bp
Length : 297 bp
Strand : +
Note : KEGG: nwi:Nwi_1981 carboxysome structural polypeptide; PFAM: microcompartments protein; SMART: microcompartments protein

DNA sequence : 
ATGGCTGAACGGATGGGCATTGCCCTGGGAATGATCGAAACACGCGGCCTGGTGCCGGCGATTGAAGCAGCGGATGCCAT
GTGCAAGGCGGCGGACGTGCGCCTCATTGGCCGCCAGTTCGTGGGAGGCGGCTACGTTACCGTGCTGGTGCGTGGTGAAA
CCGGCGCGGTGAACGCGGCGGTGCGTGCGGGCGCCGATGCTTGCGAGCGCGTGGGTGACGGCCTGGTGGCTGCGCACATC
ATCGCCCGCGTGCATGGCGAAGTCGAGGGCATTCTGCCCGAAGCGCCGTCGGCCTGA

Protein sequence : 
MAERMGIALGMIETRGLVPAIEAADAMCKAADVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARVHGEVEGILPEAPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 57
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_0121 YP_003641864.1 microcompartments protein VFG1596 Protein 2e-12 57
Tint_0121 YP_003641864.1 microcompartments protein VFG1597 Protein 5e-13 54
Tint_0121 YP_003641864.1 microcompartments protein VFG1598 Protein 4e-12 50