Gene Information

Name : Tint_0604 (Tint_0604)
Accession : YP_003642334.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 643285 - 644517 bp
Length : 1233 bp
Strand : -
Note : PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mpt:Mpe_A3640 glycolate oxidase iron-sulfur subunit

DNA sequence :
ATGGAAACCCATCTCAGCCCCGAATTCGCCAGCACGCCCGAAGGCCAGCAGGCCGAAGCCATTCTGCGCAACTGCGTGCA
CTGCGGCTTCTGCACCGCCACCTGCCCCACCTATCAACTGCTGGGCGATGAGCTCGACGGCCCGCGCGGCCGCATCTACC
AGATCAAACAGGTGCTCGAAGGCGAGGCGCCCACCCGCACCACCCAGCTCCACCTCGACCGCTGCCTGACCTGCCGCAAC
TGCGAGACCACCTGCCCGTCCGGGGTGGAATACGGCCGTCTGGTGGACATCGGCCGCGCTGTGGTCGATGCCAAGGTGGA
ACGTCCCGCCGGAGAAAAACTCGCCCGCTGGGCGCTGCGCGAAGGCATGACCTCCAGCCTGTTCGCCCCGGCCATCAAGC
TCGGCCAGGCGCTGCGCCCGCTGGTGCCCGCCGCGCTGCGCGACAAGGTGCCCCCCCGGCAGCGCGCAGGCAAACGCCCA
CAGCGCGACCACGCCCGCAAAGTGCTGATGCTGGGCGGCTGCGTGCAGCCCACGCTCATGCCCAATATCGGCGCGGCCAC
CGCCCGCGTGCTCGATGCCGTTGGCGTGCAGCCACTGCTGGCCGACGGCGCCGGTTGCTGCGGCGCCATTCGCCAACATC
TCTCCGACCACGGCGGCGCGCTGGCCGACATGAAGCGCAATGTCGATGCCTGGTGGCCGCTGGTGGAAAGCGGCGCGGTC
GAAGCCATCGTCATGGACGCCTCGGGCTGCGGCGCCATGGTCAAGGAATATGGCCACCATCTGCTGCACGATCCCGCCTA
TGCCGAACGCGCTCAGCGCATCAGCGCGCTGTGCCAGGACATCAGCGAGTACCTGCCGCAGTTCGCCGCATCACTCAAAA
CCTTGCTGAAAAACAAGCCGGTCGACCATCTCGCCTACCACCCACCCTGCACCCTGCAGCATGCGCAACAGGTGCGCGGC
GGGGCCGAGGCCCTGCTGCGCGAGCTGGGCTTCGAGGTCAAGCTGCCGCTGGAAAGCCATTTGTGTTGCGGCTCGGCCGG
CACCTACTCGGTGCTGCAGCCCGAGCTGTCGAAAGAGCTGCGCAACCGCAAGCTTCAGCATCTGGCCGAAACCGCGCCGC
AGCGCATTGTCAGCAGCAATATCGGCTGCATCCAGCATCTGCAGTCCGGCACCACCATTCTGGTGCAGCACTGGGTGGAA
CTGCTCGACGAAGCGCTGCACGGCAAACCCTGA

Protein sequence :
METHLSPEFASTPEGQQAEAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYQIKQVLEGEAPTRTTQLHLDRCLTCRN
CETTCPSGVEYGRLVDIGRAVVDAKVERPAGEKLARWALREGMTSSLFAPAIKLGQALRPLVPAALRDKVPPRQRAGKRP
QRDHARKVLMLGGCVQPTLMPNIGAATARVLDAVGVQPLLADGAGCCGAIRQHLSDHGGALADMKRNVDAWWPLVESGAV
EAIVMDASGCGAMVKEYGHHLLHDPAYAERAQRISALCQDISEYLPQFAASLKTLLKNKPVDHLAYHPPCTLQHAQQVRG
GAEALLRELGFEVKLPLESHLCCGSAGTYSVLQPELSKELRNRKLQHLAETAPQRIVSSNIGCIQHLQSGTTILVQHWVE
LLDEALHGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 4e-102 52