Gene Information

Name : Tpau_3880 (Tpau_3880)
Accession : YP_003648792.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4004787 - 4004990 bp
Length : 204 bp
Strand : -
Note : KEGG: rer:RER_05110 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCACAGGGCACTGTGAAGTGGTTCAACGCGGAGAAGGGCTTCGGCTTTATCGCTCCCGCCGACGGCTCGGATGACGT
GTTCGTCCACTACTCGGAGATCCAGGGCAACGGCTTCCGTACGCTCGAGGAGAACCAGCAGGTCGAGTTCGAGGTCGGCC
AGGGCACCAAGGGCCCGCAGGCCACCGGCGTCCGCGCTCTCTAA

Protein sequence :
MAQGTVKWFNAEKGFGFIAPADGSDDVFVHYSEIQGNGFRTLEENQQVEFEVGQGTKGPQATGVRAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-17 65