Gene Information

Name : Tpau_3949 (Tpau_3949)
Accession : YP_003648860.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 4068783 - 4069799 bp
Length : 1017 bp
Strand : -
Note : PFAM: transketolase; transketolase central region; KEGG: rha:RHA1_ro00814 transketolase, C-terminal subunit

DNA sequence :
ATGACCGAGACCCAGGACCAGGCCGAGATCTTCGGCGGCGGCGCCACCGAGCTCCGCGATAAGCGCTCCTTCGACGGCAG
CGATGTCAGCTCGATCCCCGCGTTCGTGTTCGGGGAGGAACTGGCCGACCTGGCCGACGCCGACCCGCGGATCGTCGTGC
TGACCGCCGATCTGGCCAGCGCCAACCGCGCCACGGACTTCGCCGAGCGCCATCCCGACCGGTTCATCAACATGGGCATC
GCGGAGAAGGGCATGATCACCTCCGCTGCCGGGATGGCCTCGTGCGGGTACGTGCCCTTCGCCGCGACCTTCGCATCCTT
CTCCGCGTTGCTGTGTGCCGAGCAGATCCGCACCGATTGCGCGTATCCGCGGATGCCGGTCCGGATCGTCGGGCACCACT
CCGGCATGTCGATGGGGTTCTACGGCACCAGCCACCACGCACTCGAGGATCTGGGCGTGCTGCGCACTTTCGCCGAGCTC
ACAGTGGTGTGCGCGACCGATGCCAACCACCTCCGTGCGATCCTGCGGGCATCGGTGGATCACCCTGGTGCGATGTACAT
CCGGCTCGGCCGCGGCCGCGACCCGCAGGTCTATTCGATGGTGCCCGACCTCACGCTCGGCAAGTCCATTCGGCTCCGCG
AGGGCAGCGACCTGACCATCGTCGCCACCGGCACCGAGGTGCACCCGTCGCTGGAGGCAGCGGAGATCCTGGCCGGCGAG
GGCGTGAGTGTGCGGGTGGTCGACATGCACACGGTGGCTCCGCTCGATGTCGACGAGGTTCTCGCCGCGGCCCGCGAGAC
CGGCGCCGTTCTCACCGTCGAGGAGCACAACGTGACCAACGGCCTCGGCACGGCGGTCGCCGAGGCGCTCCTGCTCGGCG
GTGCGCCGCCGGTGCGGTTCGCGAAACACGGTGTGCCCGACGAGTACATCCCGGTGGGCCCACCAGCGGCGCTGTATGCG
AAGTACCGGCTGGACGCGCCCGGGATCGCGGCCGTAGTCAGGGAGATGGTGCGGTGA

Protein sequence :
MTETQDQAEIFGGGATELRDKRSFDGSDVSSIPAFVFGEELADLADADPRIVVLTADLASANRATDFAERHPDRFINMGI
AEKGMITSAAGMASCGYVPFAATFASFSALLCAEQIRTDCAYPRMPVRIVGHHSGMSMGFYGTSHHALEDLGVLRTFAEL
TVVCATDANHLRAILRASVDHPGAMYIRLGRGRDPQVYSMVPDLTLGKSIRLREGSDLTIVATGTEVHPSLEAAEILAGE
GVSVRVVDMHTVAPLDVDEVLAAARETGAVLTVEEHNVTNGLGTAVAEALLLGGAPPVRFAKHGVPDEYIPVGPPAALYA
KYRLDAPGIAAVVREMVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 4e-29 41