Gene Information

Name : Tpau_3950 (Tpau_3950)
Accession : YP_003648861.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 4069796 - 4070671 bp
Length : 876 bp
Strand : -
Note : PFAM: transketolase; KEGG: mno:Mnod_5660 transketolase

DNA sequence :
ATGATCCCTCCGAAACAGACACCTGAGTGTGAGTCCGTCCGGACCCGCCTCGAAGACCGAGCCAAGTTCGTGCGCCTCGA
GACCGTGCGGCTGTCCCGGATCGCCGGCGCCGGCCACTACACCTCGTCCTTCTCGGCGGCAGAACTGTTCGCGGCGCTCT
ACTACTCGGTGATGAACTACCTTGCCGCGGAGCCGAAGTGGGCCGACCGCGACCGATTCGTGCTGAGCAAGGGGCATGCG
GCGATCGGCCTGTACCCGGTGCTCGCCGACGTCGGCTTCTTCCCCGAGTCCGCGCTCGACGACTACACCCGGCTGGGCAG
CCCGTTCGGCGACCACCCCGACATGAAGAAGATCCCGGGCATCGACTTCAGCTCAGGCTCCCTCGGCCACGGCCTGTCGA
TCGCCGTCGGGATGGCCCTCGCTGGCCGCGTCGGGGCACGCCCGTACCGCACGTTCTGCATGCTGGGCGACGGTGAGCTG
CACGAGGGCCAGGTCTGGGAAGCGGCGAATGCGGCTGGCCACTACCGGCTCGGCAAGCTGGTGGCCATCGTCGACCGCAA
TCGGTTGTGCATCGACGGTTTCACCGACGACGTCATGAGTGTCGAGCCCATCGAGGACCGGTTCGCCGCGTTCGGCTGGC
AGGCGCACCGTGTCGATGGGCACGACGTGGGAGCCCTGCTGGACCTATTCGACGCGCTGCCCGACGACCCCGACGGGCCA
CCCCAGGTGATCGTGGCCGACACCGTCAAGGGACGTGGCGTGAAACTCATGGAATACAACCCCGATTGGCACGTCGGCAA
TCTGGTCGGCACCGACTACGACGATGTGATCGCGGAGCTGCAGGCCGGACTGCGCCCGCTGGAGGTGGTGAAATGA

Protein sequence :
MIPPKQTPECESVRTRLEDRAKFVRLETVRLSRIAGAGHYTSSFSAAELFAALYYSVMNYLAAEPKWADRDRFVLSKGHA
AIGLYPVLADVGFFPESALDDYTRLGSPFGDHPDMKKIPGIDFSSGSLGHGLSIAVGMALAGRVGARPYRTFCMLGDGEL
HEGQVWEAANAAGHYRLGKLVAIVDRNRLCIDGFTDDVMSVEPIEDRFAAFGWQAHRVDGHDVGALLDLFDALPDDPDGP
PQVIVADTVKGRGVKLMEYNPDWHVGNLVGTDYDDVIAELQAGLRPLEVVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 7e-33 41
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 5e-33 41
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 3e-33 41
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 2e-32 41
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 7e-33 41