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Name : Tpau_3998 (Tpau_3998) Accession : YP_003648908.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : general substrate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4128372 - 4129664 bp Length : 1293 bp Strand : - Note : PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rop:ROP_72140 MFS transporter DNA sequence : GTGGCAATCGCCTCCTTCGTCGGGACATCGGTCGAATGGTACGACTTCTATCTCTATGGAACGGCTTCCGCGTTGATCCT GGGGCCGCTGTTCTTCCCCACCGCATCAGCGGCGGGGGGAGTCCTGGCCGCCTTCGCCACGTACGCGGTCGGATTCCTCG CCCGCCCACTGGGAGGCGCGATCGCCGGACACCTCGGCGATCGGATCGGCCGCAAGCGTGTGCTGGTCGCCTCCCTCGTG CTGATGGGATTGGCTACCAGTGCGATCGGTCTGCTACCCGGCTACGCCGCCATCGGAGTCGCAGCCCCGATCCTGCTCAC TGCGTTGCGGCTGCTTCAGGGGTTGTCGGCCGGAATCGAGTGGGGTGGAGCGGTTCTCCTTGCCGTCGAACACGCTCCCA CGGATCGTCGTGGTCTCTTCGGCGCCCTACCGCAGGCGGGCTCCGCCGCCGGGATGATCCTGGCCACGTCCATCTACACG GTTGTGCACACTGTGCTCGGCGGCGCCGCGTTCACCGCGTGGGGATGGCGGATCCCTTTCCTGCTCAGTGCCGTTCTTGT GATCGTCGGTCTGGTGGTGCGACTGTCGGTGCGGGATTCGGCAGAATTCGAGGAACTGCGGTCTACCGGCGCGGTTCACC GATCGCCGGTGCGCGAGGTGTTGCGGCGCCATCGACGCACCGTGGGACTGACTGTGTTGATGCGCATCGGCCAGAACTCG GTGTACACGCTCTACACCGTGTTCATGCTCACCTACATCGTCGGCGAGGTGCGCTCCGACGGTGCCCCGATCGGTCTGGT GGCCACGCTCGTCGCCTCGGTGACCGGGCTCGCGGCGACCCCGCTATGGGGAGCACTCTCCGACCGCCTCGGGCGTAGGC CCGTGTATCTGTTCGGCGCGATCGTCACCGCGGTGTTCACCGCCCCGGCCTTCGCGCTGATCGGGACCGGTTCCGCCGTG CTGATCGTGGTGGCCTTCGTGATCGGCATCAACATCGGTCACGACAGTCAGTACGGCGCTCAGGGCGCCTTCTTCGCTGA GCTGTTCCCCATCGACGTCCGCTACAGCGGTGCGTCGATCGGGTACGCGGTGGGCGCCGTGCTCGGCGGCGGGCTCACCC CGCTCGTCGCGGCGGCGTTGCTCACTGCCGGGGGCGGGACACCATGGCTGGTAGCAGGATTCGTCTCCGCGCTCGCGGTG GTCTCGGGTATCGGCGTGTACCTCGCGCCGGAGACCCGGCCGGTGCGGCCGACCGTCGCGCCGCAGCGTCCCGCGGCGGA GGCGCTCGCATGA Protein sequence : MAIASFVGTSVEWYDFYLYGTASALILGPLFFPTASAAGGVLAAFATYAVGFLARPLGGAIAGHLGDRIGRKRVLVASLV LMGLATSAIGLLPGYAAIGVAAPILLTALRLLQGLSAGIEWGGAVLLAVEHAPTDRRGLFGALPQAGSAAGMILATSIYT VVHTVLGGAAFTAWGWRIPFLLSAVLVIVGLVVRLSVRDSAEFEELRSTGAVHRSPVREVLRRHRRTVGLTVLMRIGQNS VYTLYTVFMLTYIVGEVRSDGAPIGLVATLVASVTGLAATPLWGALSDRLGRRPVYLFGAIVTAVFTAPAFALIGTGSAV LIVVAFVIGINIGHDSQYGAQGAFFAELFPIDVRYSGASIGYAVGAVLGGGLTPLVAAALLTAGGGTPWLVAGFVSALAV VSGIGVYLAPETRPVRPTVAPQRPAAEALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-55 | 43 |
| DIP2166 | NP_940476.1 | ABC transporter permease | Not tested | Not named | Protein | 1e-49 | 41 |
