Gene Information

Name : Tbis_1138 (Tbis_1138)
Accession : YP_003651753.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Unknown
Product : D-lactate dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : 1.1.2.4
Position : 1296635 - 1298086 bp
Length : 1452 bp
Strand : -
Note : PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2921 D-lactate dehydrogenase (cytochrome)

DNA sequence :
ATGTCCGCACTCGAACGGCTGACGGCACGGCTGACCGAGGTGCTCCCGCCGGGCGCGGTCATCACCGACCCCGTTCGGTT
GCGGACCTACGAGTGTGACGGGCTCACCATCCACCGCGCCACCCCGGGGGTCGTCGTGCTGCCGGAGACGACGGAGCAGG
TGGCCGAGGTGGTGCGGCTGTGCCACCGGTCGGGCGTTCCCTTCGTGGCCCGCGGCTCGGGGACCGGGCTGTCCGGCGGA
GCCCTTCCCCGGGCCGACGGGATCCTCGTCGTCACGTCGCGGATGCGGCGCATCCTGAAGATCGACATCCCGAACCGGCT
CGCCGTGGTCGAGCCCGGGGTCACCAACCTGGCGATCACCGAGGCGGTCCGGGACCAGGGGTACTACTACGCCCCCGACC
CCTCCAGCCAGCAGGTCTGCTCGATCGGCGGGAACGTCGCCGAGAACTCCGGCGGCGCCCACTGCCTGAAGTACGGCTTC
ACGGTCAACCACGTGATCGGGCTGGAGATCGTCACCCCCGAGGGGGAGGTCGTGGAGCTGTCCCACCTCGACCCCGGCTA
CGACCTGATCGGCACGTTCATCGGGTCGGAGGGCACCCTCGGCATCGCCACAAAGATCACCGTACGGCTGTCGCGCGCGC
CCGAGGCCGTGACCACCCTGCTCGCGGCGTTCCCCGGGATCGAGAGCGGCGGCCGGGCCGTGTCCGCGATCATCGGCGCC
GGGATCGTCCCCGCGGCGATCGAGATGATGGACGCGCTCGCCATCGAGGCCGCCGAGGCCGCGGTCGCCTGCGGCTACCC
CCCCGGCGCCGGCGCCGTGCTCATCGTCGAGCTCGACGGCCCGCGGGCCGAGGTGGAGAGCGAGCTCGCCGCGGTGCGGG
ACCTGTGCCTGTCGTGCGGGGCCTTCGAGATCAGGACCGCGGCGTCGGCCGAGGAGCGGGCGGCGATCTGGAAGGGCCGC
AAGTCGGCGTTCGCCGCCGTGGGCCGGATCAGCCCGGCGTACATCGTGCAGGACGGGGTGGTGCCCCGGTCCGCCCTCCC
GGAGGTGCTCGCCGCGATCGGCCGGCTCCAGGACGAGTACGGCATCCGGGTGGCGAACGTCTTCCACGCGGGCGACGGGA
ACCTCCACCCGCTCGTGCTCTTCAACGACGCCGACCCAGGGGAGGCTGAGCGGGCCGAGACGGTGAGCGGGCGGATCCTG
GACCTGTGCCTCGAGCACGGCGGCTCGATCACCGGAGAACATGGGGTAGGCGTGGACAAGGCCCGTTACATGCCGCGCAT
GTTCAGCGAGGACGATCTCGACACCATGCAGCTCGTGCGGTGCGCCTTCGACCCGGCGGGGGTGGCCAACCCCGGGAAGG
TCTTCCCCACACCGCGGCTCTGCGGGGAGGCGCCCCGGGTGCACAAGGGCGTGCACCCGCTGGTGGAGTCGGGCCTGGCG
GAGCAGTTCTGA

Protein sequence :
MSALERLTARLTEVLPPGAVITDPVRLRTYECDGLTIHRATPGVVVLPETTEQVAEVVRLCHRSGVPFVARGSGTGLSGG
ALPRADGILVVTSRMRRILKIDIPNRLAVVEPGVTNLAITEAVRDQGYYYAPDPSSQQVCSIGGNVAENSGGAHCLKYGF
TVNHVIGLEIVTPEGEVVELSHLDPGYDLIGTFIGSEGTLGIATKITVRLSRAPEAVTTLLAAFPGIESGGRAVSAIIGA
GIVPAAIEMMDALAIEAAEAAVACGYPPGAGAVLIVELDGPRAEVESELAAVRDLCLSCGAFEIRTAASAEERAAIWKGR
KSAFAAVGRISPAYIVQDGVVPRSALPEVLAAIGRLQDEYGIRVANVFHAGDGNLHPLVLFNDADPGEAERAETVSGRIL
DLCLEHGGSITGEHGVGVDKARYMPRMFSEDDLDTMQLVRCAFDPAGVANPGKVFPTPRLCGEAPRVHKGVHPLVESGLA
EQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 2e-97 51