Gene Information

Name : Arnit_0374 (Arnit_0374)
Accession : YP_003654546.1
Strain : Arcobacter nitrofigilis DSM 7299
Genome accession: NC_014166
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 356709 - 357413 bp
Length : 705 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_0708 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESP9 ABC transporter

DNA sequence : 
ATGAATGATAATGAAGTAATAATTGAGTTTAAAAATATAGTTAAAACCTATGGAAAAGGGGAAGCTAAAACTCATGCTCT
AAATGGAATAAATTTTGCTATAAAAAAAGGAGAGTTTATATCTATTATGGGTTCTAGTGGAAGTGGAAAATCCACATCTA
TGAATATAATAGGTTGTTTAGATTCTCCAAGCAGTGGAGAGTATTTATTTAATAATATAAATGTAGAAAAACTAAATCGA
AACCAATTGGCATTGATACGAAAAAATTATATTGGCTTTGTTTTTCAAGGTTTTAATTTACTTGGAAGAACAAGTGCTTT
AGAAAATGTTGAGTTACCTTTGATATATAGAAAAGTTCCTTCTAAACAAAGAAAAGAATTAGCAATGAACGCTCTAAAAA
AAGTAGGTTTAGAAAGTGTTTCTCACCATGCACCCTCACAACTTTCAGGTGGACAACAACAACGTGTTGCTATTGCAAGA
GCTTTAGTATCAGACCCTTTGATACTTTTAGCAGATGAGCCAACTGGAAACTTAGATAGTATAAAAAGTGTTGAGATTTT
AAATTTATTAAAACAGTTGAATGAAGAATTAAATATTACAATTATTATGATAACCCATGAAGAAGAGATGGCAGCATATT
CAAATAGAATAATTTATTTTAGAGATGGGCATATTGATGATAGTTTAAAAAGAGGATTTAAATAA

Protein sequence : 
MNDNEVIIEFKNIVKTYGKGEAKTHALNGINFAIKKGEFISIMGSSGSGKSTSMNIIGCLDSPSSGEYLFNNINVEKLNR
NQLALIRKNYIGFVFQGFNLLGRTSALENVELPLIYRKVPSKQRKELAMNALKKVGLESVSHHAPSQLSGGQQQRVAIAR
ALVSDPLILLADEPTGNLDSIKSVEILNLLKQLNEELNITIIMITHEEEMAAYSNRIIYFRDGHIDDSLKRGFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arnit_0374 YP_003654546.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-35 53
Arnit_0374 YP_003654546.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-25 48
Arnit_0374 YP_003654546.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-27 47
Arnit_0374 YP_003654546.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-23 44
Arnit_0374 YP_003654546.1 ABC transporter-like protein NC_012469.1.7685735. Protein 6e-18 42