Gene Information

Name : Shell_1043 (Shell_1043)
Accession : YP_003669046.1
Strain : Staphylothermus hellenicus DSM 12710
Genome accession: NC_014205
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1001339 - 1002106 bp
Length : 768 bp
Strand : +
Note : KEGG: sfu:Sfum_0252 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCAGAATGCTGAAGAAGCTAAGAATGTAAAGCTGCCTAGCAGGAGAAAACTTGAATATGTTGTTGAAGCGGTTGAGGT
GAAGAAATATTATAAGATGGGCAAGTTTATCGTGAAAGCCCTTGATGGCGTTACATTTAATGTGAAGAGAAGAGAATACG
TTAGTATAATGGGGCCAAGTGGTAGTGGTAAAACAACATTATTCAACATGATCGGAGGACTGGATAGGCCAACCGGTGGA
AAAGTCTATATTGACGGAGTCGATATAGCGATGCTGGATGCCTATGAACTAGCATGGCTTAGAGCTAAGAAGATAGGATA
TATTTTCCAAACATTCAACTTAATACCAGTACTCACAGCAGTAGAGAACGTTATGTTGCCAATGATCTTTGTAGGTACAC
CATATGAAGATGCAATAGTGAAAGCTAAGAAATTACTGGAGCTTGTTGGGCTTGGAAAATTCATACATCATAAACCAGCA
GAACTCAGCGGTGGACAGCAGCAGAGAGTGGCTGCTGCTAGAGCACTAGCAAATGATCCATCAATAATACTGGCAGATGA
ACCCACTGGAAACCTAGACTTACATACAGGCTTGAAGCTAATCAATTTATTAAAGGAAATAAATGAGAAAAAAGGTGTCA
CTATTGTTACTGCAACACATGATCTCAAAATGGTTGATGTAAGCGACCGTATTATTTGGATAAGAGATGGTAAGATAGAG
AAAATTGAGCTTAGAAGAGATATTGAAGCTGTAATGGGTGAGCAGTAG

Protein sequence : 
MQNAEEAKNVKLPSRRKLEYVVEAVEVKKYYKMGKFIVKALDGVTFNVKRREYVSIMGPSGSGKTTLFNMIGGLDRPTGG
KVYIDGVDIAMLDAYELAWLRAKKIGYIFQTFNLIPVLTAVENVMLPMIFVGTPYEDAIVKAKKLLELVGLGKFIHHKPA
ELSGGQQQRVAAARALANDPSIILADEPTGNLDLHTGLKLINLLKEINEKKGVTIVTATHDLKMVDVSDRIIWIRDGKIE
KIELRRDIEAVMGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shell_1043 YP_003669046.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-32 49
Shell_1043 YP_003669046.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-33 47
Shell_1043 YP_003669046.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-33 45
Shell_1043 YP_003669046.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-30 43