Gene Information

Name : Shell_1044 (Shell_1044)
Accession : YP_003669047.1
Strain : Staphylothermus hellenicus DSM 12710
Genome accession: NC_014205
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1002118 - 1002834 bp
Length : 717 bp
Strand : +
Note : KEGG: sfu:Sfum_0252 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGATCAAAGTAGTTGATCTCCATAAATACTATGTATTGAAGGGAGAAACCGTAAAAGCTCTTCAGGGAATAAATCTCGA
GATCTACAGGGGCGAATATGTATCCGTTCTTGGGCCAAGTGGTAGTGGTAAAACAACATTATTCAACATGATCGGAGGAC
TGGATAAGCCTACATCAGGCAAAGTATATGTTGACGGAGTAGATATTTATTCTTTGCCGAAGAAGAAACTCGCATATTTT
AGAAATAAGAAACTAGGCTATGTTTTCCAAACATATAATCTCATACCATATTTAACCGCCGTAGATAATGTAGCATTACC
CATGATATTCGCTGGTGTTCCAAGAAAGAAACGTATCGAAAAAGCACGTAGACTTCTAGAAGCAGTTGGCTTAGGGGAAA
GACTCCACCATAGACCCTTCGAGCTTAGCGGTGGACAACAACAGAGAGTAGCCATCGCTAGAGCACTAGCAAATGATCCA
TCAATAATACTGGCAGACGAGCCTACAGCTAATTTAGATCTAGTTACGGGTAAGCAAGTCATTAATTTATTGAAGGATAT
AAGCTTAACACATAACGTTACAGTCGTCACCAATACGCATGATTTAAAGATGATTGACGTAAGTGATCGAATAGTCTATA
TTAGAGACGGAAAAATCGAAAGGATAGAGGAGAGACAAACAGCTGAGATAAGAGACATAATTATTGATATAAGCTAG

Protein sequence : 
MIKVVDLHKYYVLKGETVKALQGINLEIYRGEYVSVLGPSGSGKTTLFNMIGGLDKPTSGKVYVDGVDIYSLPKKKLAYF
RNKKLGYVFQTYNLIPYLTAVDNVALPMIFAGVPRKKRIEKARRLLEAVGLGERLHHRPFELSGGQQQRVAIARALANDP
SIILADEPTANLDLVTGKQVINLLKDISLTHNVTVVTNTHDLKMIDVSDRIVYIRDGKIERIEERQTAEIRDIIIDIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shell_1044 YP_003669047.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-39 52
Shell_1044 YP_003669047.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-38 46
Shell_1044 YP_003669047.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-35 46
Shell_1044 YP_003669047.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-39 44