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Name : Tmath_1861 (Tmath_1861) Accession : YP_003677563.1 Strain : Thermoanaerobacter mathranii A3 Genome accession: NC_014209 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1881471 - 1884572 bp Length : 3102 bp Strand : - Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: aba:Acid345_3755 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase DNA sequence : ATGAATCTCAATCAAAATTTTGAGAGTGTGGTAGAGCAGGCGGCCATCAAATGGTTTAAAGATATAGGTTACGAATACCT GCACGGCAACGAAATACCCGTTGAAGACAGAAAAGACTACAGAGAGGTCATTTTAAAAAACAGGCTTTATAAGGCTTTAA TAAGATTGAATCCCGAACTTCCGCTGGAGTGCATTGAGGAAGCGGTGCGCCAGCTGAAGAACCTCCAATATCCGAGGATA GAGCTGAACAACAGAGAGATACATAAAGTATACCGCAATGGTGCGAAAGTTACAAGACGCAACAGCGAAGGCGAAGAGGT CGGAGAAATAGTAAAGATATTTGACTATGAAAATATAGAGAACAATGAATTTCTTGTCTGCAACCAGGTAAAAATCAAAG GTGCAGGTTTAAGAATCCCTGATATTGTGGTTTATATTAACGGCCTGCCAGTAGGATTGTTCGAACTGAAAAATCCATTA GATGAGGCGGCTACAATAGAAGGGGCATATAGGCAGCTTGAGCTGTACAAAAGGGATATTCCCGACATTTTTGCTTACAA TGAGATCTGCGTTGTATCTGATGGGAATAAAGCAAAAGCAGGAACGATTACCACACCCTGGGAGAGGTTTTCTGCATGGA AATCCATTGACGGTGTCAGCAGCGTAGAGGGGATGCCAGAACTTGAAGTTTTGATAAAAGGCATGTTTGATAAAAGAAGA GTTCTCGACATAATAAGGAATTTTATCACCTTTTCTACTGCTAAGGATGAAGTAATTAAAATTATGGCTATGTATCACCA GTATTACGGTGTAAATAAAGCAGTAGAAGAAACAATCAGGGCCACATCTCCTGGCGGTGACAGAAGAATAGGTACATTCT GGCATACTCAAGGCAGCGGCAAAAGCCTTTCCATGGTGTTTTATACGGGAAAGATAATAGAGCTTAAAGAACTTCAGAAT CCTACAATTGTAGTCATTACCGACCGCAACGACCTTGACGACCAGCTGTATGAAACTTTTTGCAATGCAAGCGACCTAAT TCCATATCCAAAGCAGGCAGAAAGCGTAGGAGACTTAAAAGAAAAACTTTCGCAGATTGCAGCAGGCGGCATCTTTTTTA CCACAATACAGAAATTTCAGGCAGAAGCAGAAGAGGTTTCAGAGGTGGTTGACCCCAAGCTCAAAAAAGCTTTAAAGAAG GGCAAAACCTATCCCCTTCTTTCTGACCGTAGCAATATCATTGTTATTGTCGATGAAGCTCACAGGTCGCACTATGAATT TATTGACGGCTTTGCAAAGTATATAAGGCAGGCACTTCCTAACGCCAGCTTCATTGGCTTTACGGGGACACCTATTGATC TTGAAGACAGGTCTACACTTCAGGTGTTTGGAAACTATATCAGTATCTATGATATGAAGCAGGCGGTAGAAGACAAAGCC ATTGTGCCTATTTACTACGAGGGAAGGTTGGTAAAACTTCATTTGATAAACGAAAATATTGACAGAGACTTTGAAGAAGT GACAGAAGGCGAAGAAGAAGAGGTAAAGAACAAGCTGAAGACAAAATGGGCAGCTTTAGAAGCACTGGTAGGAACCAAAG AAAGGCTTGAAACCATAGCAAGGGATATTGTAGAGCACTTTGAAGAAAGGTGTAAGGTTCTTGAGGGCAAAGGCATGATA GTATGTATGAGCCGAAGGATTTGCGTTGACCTTTACAACGAAATAATTAAGTTAAGACCGCACTGGCACAGTGATGACTT AGACAAAGGCGTAATTAAAATTGTAATGTCAGGAAATGCTTCGAAAGATCCTAAAGAATTTTTGACCCACCTATATACAA AATCCCAAATAAAAGAGATTGAAAAAAGAATGAAAGACCCAAACGATCCTCTTAAACTGGTAATTGTCAGGGATATGTGG CTTACTGGCTTTGATGTGCCGTGCCTGCATACAATGTATATTGACAAGCCAATGCGAGGGCACAACTTAATGCAGGCTAT AGCCAGAGTAAACAGGGTCTTTAAGGACAAACCTGCAGGATTGGTTGTAGATTACATAGGTATTGCTGATGACTTAAAAC TGGCACTGGCAAACTACACAAGGAGCACGGGAAAAGAGGCTGCTACCTTACCCATCGATGAAGCCATAAGAATTATGCAG GAGAAGTACGACATTGTTTGTTCATATTTCCACGGCATTGATTTTTCGGGTTGGGAAGAAAAAAGTGCAGAAGACAAACT TAGCCTTTTAAAACAGGCTATGGACCTAATAAATAAAGATGAAACCACAAAGAAAAATTTTTTGGATCAGTGCATGGCAT TGTGCAAGGCTTTTGCCCTTGTAGTACCAAGAGAAGAAGCGATGCGTATTCGTTCCGATGTTGCTTTTTTCCAGGCAGTA AGAAGCAATATTGTCAAATACACGCCACCTAAAGGATTATCAATCGAAGAACTGGACAGTGCCATAAAGCAGATTATTTC CGAGGGTGTTGCTGCAAGCGACAAACCAATTGACATATTTGACGCGGCGGGACTTAAAAAGCCAGACTTGTCTATTCTGA GTGAGGAATTTTTAAATAAGCTTATGGGGCATGAGAATAAAAACTTGCAGATTGAGGTTTTGCGCAAGTTGTTGAATGAT GAAATCAAAGCCAAAATCAGGAAAAATCATGTTAAGTATGCTTCTTTTAAAGAAATGATAGAAAGAGTTTTGAATAAGTA TCATAATCGTGCTATTACATCTGCTGAGGTTATAAAACACCTTATTGATTTGGCAAAAGAAATGCAGAATATGGACAAAC GGGCAAAAGAAATGAACTTAACGGAAGAAGAAATGGCTTTTTACGACATTGTATGTCAGGGTGAAGAGGCTATTTTAAAT GACGAGGAAGCAAAGGAAATTGCAAGAGAGCTTGTGCGAATTATAAAAAGTAAAACCGAGGGGCAGGTGGATTGGACTAT AAAAGAAAACATTAAGGCATCCATCAGGGCAACTGTAAAGAGATTACTAAGAAGAAAGGGCTTCAAAGATCCACAAAAGC TTGATAATGTAGTTAAATTGGTCATTGAACAGGCTGTATCTCTCTTTGAAGATGCTGCTTAG Protein sequence : MNLNQNFESVVEQAAIKWFKDIGYEYLHGNEIPVEDRKDYREVILKNRLYKALIRLNPELPLECIEEAVRQLKNLQYPRI ELNNREIHKVYRNGAKVTRRNSEGEEVGEIVKIFDYENIENNEFLVCNQVKIKGAGLRIPDIVVYINGLPVGLFELKNPL DEAATIEGAYRQLELYKRDIPDIFAYNEICVVSDGNKAKAGTITTPWERFSAWKSIDGVSSVEGMPELEVLIKGMFDKRR VLDIIRNFITFSTAKDEVIKIMAMYHQYYGVNKAVEETIRATSPGGDRRIGTFWHTQGSGKSLSMVFYTGKIIELKELQN PTIVVITDRNDLDDQLYETFCNASDLIPYPKQAESVGDLKEKLSQIAAGGIFFTTIQKFQAEAEEVSEVVDPKLKKALKK GKTYPLLSDRSNIIVIVDEAHRSHYEFIDGFAKYIRQALPNASFIGFTGTPIDLEDRSTLQVFGNYISIYDMKQAVEDKA IVPIYYEGRLVKLHLINENIDRDFEEVTEGEEEEVKNKLKTKWAALEALVGTKERLETIARDIVEHFEERCKVLEGKGMI VCMSRRICVDLYNEIIKLRPHWHSDDLDKGVIKIVMSGNASKDPKEFLTHLYTKSQIKEIEKRMKDPNDPLKLVIVRDMW LTGFDVPCLHTMYIDKPMRGHNLMQAIARVNRVFKDKPAGLVVDYIGIADDLKLALANYTRSTGKEAATLPIDEAIRIMQ EKYDIVCSYFHGIDFSGWEEKSAEDKLSLLKQAMDLINKDETTKKNFLDQCMALCKAFALVVPREEAMRIRSDVAFFQAV RSNIVKYTPPKGLSIEELDSAIKQIISEGVAASDKPIDIFDAAGLKKPDLSILSEEFLNKLMGHENKNLQIEVLRKLLND EIKAKIRKNHVKYASFKEMIERVLNKYHNRAITSAEVIKHLIDLAKEMQNMDKRAKEMNLTEEEMAFYDIVCQGEEAILN DEEAKEIARELVRIIKSKTEGQVDWTIKENIKASIRATVKRLLRRKGFKDPQKLDNVVKLVIEQAVSLFEDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 43 |
